[][] ath   AT5G04040 Gene
functional annotation
Function   Patatin-like phospholipase family protein
GO BP
GO:0019433 [list] [network] triglyceride catabolic process  (2 genes)  IMP  
GO:0006071 [list] [network] glycerol metabolic process  (24 genes)  IEA  
GO:0006641 [list] [network] triglyceride metabolic process  (26 genes)  IGI  
GO CC
GO:0012511 [list] [network] monolayer-surrounded lipid storage body  (18 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004806 [list] [network] triglyceride lipase activity  (9 genes)  IDA IGI  
KEGG ath00100 [list] [network] Steroid biosynthesis (35 genes)
ath00561 [list] [network] Glycerolipid metabolism (61 genes)
ath00564 [list] [network] Glycerophospholipid metabolism (96 genes)
ath00565 [list] [network] Ether lipid metabolism (26 genes)
ath00590 [list] [network] Arachidonic acid metabolism (17 genes)
ath00591 [list] [network] Linoleic acid metabolism (9 genes)
ath00592 [list] [network] alpha-Linolenic acid metabolism (44 genes)
Protein NP_001332745.1  NP_196024.1 
BLAST NP_001332745.1  NP_196024.1 
Orthologous [Ortholog page] SDP1-LIKE (ath)LOC4327023 (osa)LOC4334536 (osa)LOC7464118 (ppo)LOC7473582 (ppo)LOC11412275 (mtr)LOC11414821 (mtr)LOC25496763 (mtr)LOC100258980 (vvi)LOC100382466 (zma)SDP1-4 (gma)SDP1 (gma)SDP1-3 (gma)SDP1-1 (gma)LOC101255254 (sly)LOC101263951 (sly)LOC103636624 (zma)LOC103830087 (bra)LOC103847336 (bra)LOC103850528 (bra)LOC103855549 (bra)
Subcellular
localization
wolf
nucl 4,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001332745.1)
nucl 4,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for NP_196024.1)
Subcellular
localization
TargetP
chlo 8,  other 7  (predict for NP_001332745.1)
chlo 8,  other 7  (predict for NP_196024.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00592 alpha-Linolenic acid metabolism 2
ath01200 Carbon metabolism 2
Genes directly connected with SDP1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.2 AT5G18630 alpha/beta-Hydrolases superfamily protein [detail] 831981
8.1 TPS11 trehalose phosphatase/synthase 11 [detail] 816385
7.9 TPS8 trehalose-6-phosphatase synthase S8 [detail] 843365
6.6 ACX2 acyl-CoA oxidase 2 [detail] 836635
6.0 CRY1 cryptochrome 1 [detail] 826470
5.8 AT3G62010 metal ion-binding protein [detail] 825374
5.3 AT4G14500 Polyketide cyclase/dehydrase and lipid transport superfamily protein [detail] 827097
Coexpressed
gene list
[Coexpressed gene list for SDP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250877_at
250877_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250877_at
250877_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250877_at
250877_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830283    
Refseq ID (protein) NP_001332745.1 
NP_196024.1 


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