[←][→] ath   At5g04310 Gene
functional annotation
Function   Pectin lyase-like superfamily protein      
GO BP
GO:0010118 [list] [network] stomatal movement  (69 genes)  IMP  
GO:0045490 [list] [network] pectin catabolic process  (78 genes)  IEA  
GO:0009664 [list] [network] plant-type cell wall organization  (180 genes)  IMP  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0016020 [list] [network] membrane  (3629 genes)  TAS  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (25 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (108 genes)
Protein NP_001318478.1  NP_001331869.1  NP_196051.2 
BLAST NP_001318478.1  NP_001331869.1  NP_196051.2 
Orthologous [Ortholog page] 9612 (sly)  AT3G07010 (ath)  AT3G24230 (ath)  AT3G24670 (ath)  AT3G27400 (ath)  AT3G53190 (ath)  PMR6 (ath)  AT4G13210 (ath)  AT4G13710 (ath)  AT4G24780 (ath)  AT5G48900 (ath)  AT5G63180 (ath)  AT1G04680 (ath)  AT1G67750 (ath)  LOC4335013 (osa)  LOC4348800 (osa)  LOC7453817 (ppo)  LOC7458080 (ppo)  LOC7460526 (ppo)  LOC7467675 (ppo)  LOC7468445 (ppo)  LOC7469382 (ppo)  LOC7477066 (ppo)  LOC7479851 (ppo)  LOC7481246 (ppo)  LOC7488611 (ppo)  LOC7494805 (ppo)  LOC11408829 (mtr)  LOC11409358 (mtr)  LOC11411484 (mtr)  LOC11426383 (mtr)  LOC18100132 (ppo)  LOC25483116 (mtr)  LOC25483947 (mtr)  LOC25485548 (mtr)  LOC25489517 (mtr)  LOC25499338 (mtr)  LOC100101868 (gma)  LOC100775595 (gma)  LOC100779940 (gma)  LOC100781845 (gma)  LOC100782388 (gma)  LOC100787082 (gma)  LOC100789303 (gma)  LOC100790659 (gma)  LOC100794814 (gma)  LOC100808438 (gma)  LOC100809277 (gma)  LOC100810380 (gma)  LOC100814679 (gma)  LOC100815062 (gma)  LOC100816256 (gma)  LOC101244298 (sly)  LOC101252082 (sly)  PL (sly)  LOC101254639 (sly)  LOC101257697 (sly)  LOC101260911 (sly)  LOC101263458 (sly)  LOC101264881 (sly)  LOC101264933 (sly)  LOC103828610 (bra)  LOC103828688 (bra)  LOC103829999 (bra)  LOC103831011 (bra)  LOC103831201 (bra)  LOC103833411 (bra)  LOC103834896 (bra)  LOC103836561 (bra)  LOC103837270 (bra)  LOC103837461 (bra)  LOC103841243 (bra)  LOC103841403 (bra)  LOC103843635 (bra)  LOC103844229 (bra)  LOC103847312 (bra)  LOC103850282 (bra)  LOC103852424 (bra)  LOC103854567 (bra)  LOC103855563 (bra)  LOC103861505 (bra)  LOC103862557 (bra)  LOC103863605 (bra)  LOC103863641 (bra)  LOC103870710 (bra)  LOC103873738 (bra)  LOC103875221 (bra)  LOC112323533 (ppo)  LOC123043123 (tae)  LOC123044722 (tae)  LOC123051018 (tae)  LOC123119621 (tae)  LOC123180958 (tae)  LOC123186967 (tae)  LOC123430122 (hvu)  LOC123431519 (hvu) 
Subcellular
localization
wolf
plas 5,  chlo 1,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  pero 1,  golg 1,  chlo_mito 1,  E.R._vacu 1  (predict for NP_001318478.1)
plas 4,  chlo 1,  nucl 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  pero 1,  golg 1,  cyto_nucl 1,  chlo_mito 1,  E.R._vacu 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001331869.1)
plas 5,  chlo 1,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  pero 1,  golg 1,  chlo_mito 1,  E.R._vacu 1  (predict for NP_196051.2)
Subcellular
localization
TargetP
mito 2  (predict for NP_001318478.1)
mito 2  (predict for NP_001331869.1)
mito 2  (predict for NP_196051.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00330 Arginine and proline metabolism 2
ath00053 Ascorbate and aldarate metabolism 2
ath00562 Inositol phosphate metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
Genes directly connected with AT5G04310 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
4.2 ERD5 Methylenetetrahydrofolate reductase family protein [detail] 822833
4.1 CRK29 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [detail] 827893
4.0 AT4G18340 Glycosyl hydrolase superfamily protein [detail] 827561
3.9 SLAH2 SLAC1 homologue 2 [detail] 828910
Coexpressed
gene list		 [Coexpressed gene list for AT5G04310]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245708_at
245708_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245708_at
245708_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245708_at
245708_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830310      
Refseq ID (protein) NP_001318478.1 
NP_001331869.1 
NP_196051.2 


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