[←][→] ath   At5g04620 Gene
functional annotation
Function   biotin F      
GO BP
GO:0009102 [list] [network] biotin biosynthetic process  (3 genes)  IDA IMP  
GO CC
GO:0005777 [list] [network] peroxisome  (311 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0008710 [list] [network] 8-amino-7-oxononanoate synthase activity  (1 genes)  IEA IGI  
GO:0030170 [list] [network] pyridoxal phosphate binding  (26 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (5771 genes)  IEA  
KEGG ath00780 [list] [network] Biotin metabolism (16 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_001332170.1  NP_196082.2  NP_974731.1 
BLAST NP_001332170.1  NP_196082.2  NP_974731.1 
Orthologous [Ortholog page] LOC4327870 (osa)  LOC4349380 (osa)  LOC11411786 (mtr)  LOC18094027 (ppo)  LOC100776585 (gma)  LOC100820189 (gma)  LOC101249827 (sly)  LOC103847272 (bra)  LOC123052472 (tae)  LOC123058524 (tae)  LOC123065619 (tae)  LOC123128515 (tae)  LOC123181687 (tae)  LOC123439484 (hvu)  LOC123440234 (hvu) 
Subcellular
localization
wolf
plas 6,  vacu 2,  E.R. 1  (predict for NP_001332170.1)
plas 4,  E.R. 3,  cyto_plas 3,  chlo 1  (predict for NP_196082.2)
plas 6,  vacu 2,  E.R. 1  (predict for NP_974731.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001332170.1)
other 8  (predict for NP_196082.2)
other 7  (predict for NP_974731.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 6
ath00061 Fatty acid biosynthesis 5
ath01212 Fatty acid metabolism 5
ath00780 Biotin metabolism 4
ath00620 Pyruvate metabolism 4
Genes directly connected with BIOF on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.8 EMB3141 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 835107
7.5 BIO2 Radical SAM superfamily protein [detail] 818937
7.1 LPD1 lipoamide dehydrogenase 1 [detail] 820951
4.6 AT1G42430 inactive purple acid phosphatase-like protein [detail] 840847
Coexpressed
gene list		 [Coexpressed gene list for BIOF]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250837_at
250837_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250837_at
250837_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250837_at
250837_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830339      
Refseq ID (protein) NP_001332170.1 
NP_196082.2 
NP_974731.1 


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