[←][→] ath   At5g05140 Gene
functional annotation
Function   Transcription elongation factor (TFIIS) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006914 [list] [network] autophagy  (32 genes)  IEA  
GO:0009863 [list] [network] salicylic acid mediated signaling pathway  (77 genes)  IEA  
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (147 genes)  IEA  
GO:0071215 [list] [network] cellular response to abscisic acid stimulus  (230 genes)  IEA  
GO:0072330 [list] [network] monocarboxylic acid biosynthetic process  (239 genes)  IEA  
GO:0009723 [list] [network] response to ethylene  (241 genes)  IEA  
GO:0010200 [list] [network] response to chitin  (304 genes)  IEA  
GO:0009966 [list] [network] regulation of signal transduction  (396 genes)  IEA  
GO:0002376 [list] [network] immune system process  (453 genes)  IEA  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IEA  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_196133.3 
BLAST NP_196133.3 
Orthologous [Ortholog page] AT3G10820 (ath)  LOC4338792 (osa)  LOC7458912 (ppo)  LOC7495686 (ppo)  LOC11413295 (mtr)  LOC100775579 (gma)  LOC100799367 (gma)  LOC100817835 (gma)  LOC101243966 (sly)  LOC101248344 (sly)  LOC101249035 (sly)  LOC103846869 (bra)  LOC103850571 (bra)  LOC103855614 (bra)  LOC103859367 (bra)  LOC103870429 (bra)  LOC112937645 (osa)  LOC123055785 (tae)  LOC123132933 (tae)  LOC123182023 (tae)  LOC123442966 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_196133.3)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_196133.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00053 Ascorbate and aldarate metabolism 2
ath00562 Inositol phosphate metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00564 Glycerophospholipid metabolism 2
Genes directly connected with AT5G05140 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.8 SYP21 syntaxin of plants 21 [detail] 831546
6.7 RHA1 winged-helix DNA-binding transcription factor family protein [detail] 834610
6.6 AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 829118
3.8 NTM1 NAC with transmembrane motif1 [detail] 828149
Coexpressed
gene list		 [Coexpressed gene list for AT5G05140]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250809_at
250809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250809_at
250809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250809_at
250809_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830396      
Refseq ID (protein) NP_196133.3 


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