[←][→] ath   At5g05550 Gene
functional annotation
Function   sequence-specific DNA binding transcription factor    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0035066 [list] [network] positive regulation of histone acetylation  (3 genes)  ISS  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (80 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO:0010468 [list] [network] regulation of gene expression  (2177 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001332681.1  NP_568158.1  NP_850774.1 
BLAST NP_001332681.1  NP_568158.1  NP_850774.1 
Orthologous [Ortholog page] AT3G11100 (ath)  AT3G58630 (ath)  LOC4325908 (osa)  LOC4339599 (osa)  LOC7462084 (ppo)  LOC7465822 (ppo)  LOC7490318 (ppo)  LOC11417768 (mtr)  LOC18094428 (ppo)  LOC25485964 (mtr)  LOC100784918 (gma)  LOC100785349 (gma)  LOC100811154 (gma)  LOC100815241 (gma)  LOC101055599 (sly)  LOC101246435 (sly)  LOC101247539 (sly)  LOC101252652 (sly)  LOC103830171 (bra)  LOC103841738 (bra)  LOC103846902 (bra)  LOC103847088 (bra)  LOC103870374 (bra)  LOC123050643 (tae)  LOC123061908 (tae)  LOC123068007 (tae)  LOC123070598 (tae)  LOC123079005 (tae)  LOC123145530 (tae)  LOC123183069 (tae)  LOC123444084 (hvu)  LOC123450093 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001332681.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_568158.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_850774.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001332681.1)
other 7  (predict for NP_568158.1)
other 7  (predict for NP_850774.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G05550 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 ORG4 OBP3-responsive protein 4 (ORG4) [detail] 815155
6.3 AT3G11100 sequence-specific DNA binding transcription factor [detail] 820281
5.9 DJ1C Class I glutamine amidotransferase-like superfamily protein [detail] 829548
5.2 AT4G37483 uncharacterized protein [detail] 6240500
Coexpressed
gene list		 [Coexpressed gene list for AT5G05550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250766_at
250766_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250766_at
250766_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250766_at
250766_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830438      
Refseq ID (protein) NP_001332681.1 
NP_568158.1 
NP_850774.1 


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