[←][→] ath   At5g06440 Gene
functional annotation
Function   polyketide cyclase/dehydrase/lipid transport superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009637 [list] [network] response to blue light  (160 genes)  IEA  
GO:0044281 [list] [network] small molecule metabolic process  (2411 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001031842.1  NP_001190241.1  NP_001318492.1  NP_001332440.1  NP_001332441.1  NP_196262.3 
BLAST NP_001031842.1  NP_001190241.1  NP_001318492.1  NP_001332440.1  NP_001332441.1  NP_196262.3 
Orthologous [Ortholog page] AT3G11720 (ath)  LOC7488076 (ppo)  LOC9267082 (osa)  LOC18100606 (ppo)  LOC25483662 (mtr)  LOC25499510 (mtr)  LOC100792855 (gma)  LOC100798284 (gma)  LOC100805715 (gma)  LOC100813944 (gma)  LOC101243920 (sly)  LOC101245600 (sly)  LOC101669848 (tae)  LOC103846985 (bra)  LOC103855675 (bra)  LOC103859405 (bra)  LOC103870315 (bra)  LOC123090776 (tae)  LOC123095786 (tae)  LOC123447291 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  cysk 1  (predict for NP_001031842.1)
nucl 5,  cyto 3,  cysk_nucl 3  (predict for NP_001190241.1)
cyto 7,  nucl 1,  chlo 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001318492.1)
cyto 4,  nucl 3,  cysk 2,  chlo 1,  nucl_plas 1  (predict for NP_001332440.1)
cyto_nucl 4,  nucl 4,  cyto 4,  cysk 1  (predict for NP_001332441.1)
nucl 5,  cyto 4,  chlo 1,  cysk 1  (predict for NP_196262.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001031842.1)
other 8  (predict for NP_001190241.1)
other 8  (predict for NP_001318492.1)
other 8  (predict for NP_001332440.1)
other 9  (predict for NP_001332441.1)
other 8  (predict for NP_196262.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G06440 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
4.8 ADK1 dual specificity kinase 1 [detail] 839368
4.6 AT5G53020 Ribonuclease P protein subunit P38-like protein [detail] 835381
4.5 AT5G24340 3'-5' exonuclease domain-containing protein [detail] 832504
Coexpressed
gene list		 [Coexpressed gene list for AT5G06440]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250728_at
250728_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250728_at
250728_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250728_at
250728_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830532      
Refseq ID (protein) NP_001031842.1 
NP_001190241.1 
NP_001318492.1 
NP_001332440.1 
NP_001332441.1 
NP_196262.3 


The preparation time of this page was 0.1 [sec].