[←][→] ath   AT5G06680 Gene
functional annotation
Function   spindle pole body component 98  
GO BP
GO:0090063 [list] [network] positive regulation of microtubule nucleation  (2 genes)  IDA  
GO:0051415 [list] [network] microtubule nucleation by interphase microtubule organizing center  (6 genes)  IBA  
GO:0007020 [list] [network] microtubule nucleation  (11 genes)  TAS  
GO:0051225 [list] [network] spindle assembly  (33 genes)  IBA  
GO:0031122 [list] [network] cytoplasmic microtubule organization  (42 genes)  IBA  
GO:0009624 [list] [network] response to nematode  (84 genes)  IDA  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IBA  
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  IBA  
GO CC
GO:0008275 [list] [network] gamma-tubulin small complex  (2 genes)  IBA  
GO:0000923 [list] [network] equatorial microtubule organizing center  (4 genes)  IBA  
GO:0000930 [list] [network] gamma-tubulin complex  (8 genes)  IBA IDA  
GO:0009898 [list] [network] cytoplasmic side of plasma membrane  (15 genes)  IDA  
GO:0000922 [list] [network] spindle pole  (16 genes)  IEA  
GO:0055028 [list] [network] cortical microtubule  (23 genes)  IDA  
GO:0005813 [list] [network] centrosome  (37 genes)  IBA  
GO:0005819 [list] [network] spindle  (82 genes)  IDA  
GO:0005938 [list] [network] cell cortex  (95 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (121 genes)  IDA  
GO:0005874 [list] [network] microtubule  (186 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0043015 [list] [network] gamma-tubulin binding  (5 genes)  IBA  
GO:0051011 [list] [network] microtubule minus-end binding  (8 genes)  IBA  
GO:0015631 [list] [network] tubulin binding  (135 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_196286.1 
BLAST NP_196286.1 
Orthologous [Ortholog page] LOC4347202 (osa)  LOC7455634 (ppo)  LOC11437941 (mtr)  LOC100245188 (vvi)  LOC100280166 (zma)  LOC100784710 (gma)  LOC100811956 (gma)  LOC101243735 (sly)  LOC103850631 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2  (predict for NP_196286.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_196286.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SPC98 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 PUM2 pumilio 2 [detail] 817468
5.7 EMB3131 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 827823
5.4 AT1G78880 Ubiquitin-specific protease family C19-related protein [detail] 844225
Coexpressed
gene list		 [Coexpressed gene list for SPC98]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250686_at
250686_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250686_at
250686_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250686_at
250686_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830557      
Refseq ID (protein) NP_196286.1 


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