[←][→] ath   AT5G06770 Gene
functional annotation
Function   KH domain-containing protein / zinc finger (CCCH type) family protein  
GO BP
GO:1900057 [list] [network] positive regulation of leaf senescence  (16 genes)  IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (63 genes)  IGI  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001332009.1  NP_001332010.1  NP_001332011.1  NP_001332012.1  NP_001332013.1  NP_196295.1 
BLAST NP_001332009.1  NP_001332010.1  NP_001332011.1  NP_001332012.1  NP_001332013.1  NP_196295.1 
Orthologous [Ortholog page] AT3G12130 (ath)  LOC4328599 (osa)  LOC4337319 (osa)  LOC4341537 (osa)  LOC7455767 (ppo)  LOC7461390 (ppo)  LOC7468933 (ppo)  LOC11430803 (mtr)  LOC11446765 (mtr)  LOC25483515 (mtr)  LOC100191185 (zma)  LOC100191993 (zma)  LOC100192020 (zma)  LOC100240955 (vvi)  LOC100245220 (vvi)  LOC100263958 (vvi)  LOC100284355 (zma)  LOC100777939 (gma)  LOC100778470 (gma)  LOC100792652 (gma)  LOC100803981 (gma)  LOC100817463 (gma)  LOC100818781 (gma)  LOC101251616 (sly)  LOC101252539 (sly)  LOC101262368 (sly)  LOC101262841 (sly)  LOC101267206 (sly)  LOC103845792 (bra)  LOC103859428 (bra)  LOC103870275 (bra) 
Subcellular
localization
wolf
chlo 6,  mito 1,  pero 1,  nucl 1,  extr 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1  (predict for NP_001332009.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for NP_001332010.1)
cyto 5,  nucl 2,  chlo 1,  extr 1  (predict for NP_001332011.1)
chlo 6,  mito 1,  pero 1,  nucl 1,  extr 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1  (predict for NP_001332012.1)
chlo 6,  mito 1,  pero 1,  nucl 1,  extr 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1  (predict for NP_001332013.1)
cyto 4,  nucl 4,  pero 1  (predict for NP_196295.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_001332009.1)
mito 3,  chlo 3  (predict for NP_001332010.1)
other 7,  chlo 3  (predict for NP_001332011.1)
mito 4  (predict for NP_001332012.1)
mito 4  (predict for NP_001332013.1)
other 4,  mito 3  (predict for NP_196295.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G06770 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.9 CDS5 cytidinediphosphate diacylglycerol synthase 5 [detail] 825233
4.8 AT4G24810 Protein kinase superfamily protein [detail] 828584
4.4 AT1G16020 vacuolar fusion protein (DUF1712) [detail] 838172
Coexpressed
gene list		 [Coexpressed gene list for AT5G06770]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250647_at
250647_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250647_at
250647_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250647_at
250647_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830566      
Refseq ID (protein) NP_001332009.1 
NP_001332010.1 
NP_001332011.1 
NP_001332012.1 
NP_001332013.1 
NP_196295.1 


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