[←][→] ath   AT5G06980 Gene
functional annotation
Function   hypothetical protein  
GO BP
GO:0007623 [list] [network] circadian rhythm  (111 genes)  IEA  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001190245.1  NP_001190246.1  NP_001330537.1  NP_568176.1  NP_850785.1 
BLAST NP_001190245.1  NP_001190246.1  NP_001330537.1  NP_568176.1  NP_850785.1 
Orthologous [Ortholog page] ACI112 (sly)  AT3G12320 (ath)  LOC4326913 (osa)  LOC7455803 (ppo)  LOC7462803 (ppo)  LOC11423831 (mtr)  LOC100264272 (vvi)  LOC100381542 (zma)  LOC100785636 (gma)  LOC100810608 (gma)  LOC100817056 (gma)  LOC103847102 (bra)  LOC103859441 (bra)  LOC103870257 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001190245.1)
nucl 9  (predict for NP_001190246.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001330537.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_568176.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_850785.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001190245.1)
other 7,  mito 3  (predict for NP_001190246.1)
other 7,  mito 3  (predict for NP_001330537.1)
other 7,  mito 3  (predict for NP_568176.1)
other 7,  mito 3  (predict for NP_850785.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
Genes directly connected with AT5G06980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
19.7 AT3G12320 hypothetical protein [detail] 820411
14.0 AT3G54500 agglutinin-like protein [detail] 824615
13.3 BBX28 B-box type zinc finger family protein [detail] 828839
12.2 STO B-box zinc finger family protein [detail] 837113
9.8 COL5 CONSTANS-like 5 [detail] 835872
8.1 AT1G69570 Dof-type zinc finger DNA-binding family protein [detail] 843293
8.1 AT3G53830 Regulator of chromosome condensation (RCC1) family protein [detail] 824550
6.0 AT5G06970 plant/protein (DUF810) [detail] 830588
4.8 AT5G64850 sorbin/SH3 domain protein [detail] 836608
Coexpressed
gene list		 [Coexpressed gene list for AT5G06980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250665_at
250665_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250665_at
250665_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250665_at
250665_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830589      
Refseq ID (protein) NP_001190245.1 
NP_001190246.1 
NP_001330537.1 
NP_568176.1 
NP_850785.1 


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