[][] ath   AT5G07400 Gene
functional annotation
Function   forkhead-associated domain-containing protein / FHA domain-containing protein
GO BP
GO:0000012 [list] [network] single strand break repair  (4 genes)  IBA  
GO:0006302 [list] [network] double-strand break repair  (108 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0017005 [list] [network] 3'-tyrosyl-DNA phosphodiesterase activity  (2 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0016818 [list] [network] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides  (748 genes)  IEA  
KEGG
Protein NP_001332333.1  NP_001332334.1  NP_001332335.1  NP_001332336.1  NP_001332337.1  NP_001332338.1  NP_001332339.1  NP_196357.2 
BLAST NP_001332333.1  NP_001332334.1  NP_001332335.1  NP_001332336.1  NP_001332337.1  NP_001332338.1  NP_001332339.1  NP_196357.2 
Orthologous [Ortholog page] LOC4335738 (osa)LOC7484355 (ppo)LOC11437260 (mtr)LOC100243589 (vvi)LOC100382237 (zma)LOC100793651 (gma)LOC101248663 (sly)LOC103850653 (bra)
Subcellular
localization
wolf
mito 3,  nucl 3,  cyto_mito 2,  cyto 1,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_001332333.1)
mito 4,  nucl 3,  cyto_mito 2,  cyto 1,  nucl_plas 1  (predict for NP_001332334.1)
mito 4,  nucl 3,  cyto_mito 2,  cyto 1,  nucl_plas 1  (predict for NP_001332335.1)
nucl 4,  mito 3,  cyto_mito 2,  cysk_nucl 2  (predict for NP_001332336.1)
nucl 3,  mito 3,  chlo 2,  cyto_nucl 2  (predict for NP_001332337.1)
mito 3,  nucl 3,  cyto_mito 2,  chlo 1,  cyto 1,  nucl_plas 1  (predict for NP_001332338.1)
mito 3,  nucl 3,  cyto_mito 2,  cyto 1,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_001332339.1)
mito 4,  nucl 3,  chlo 1,  cyto 1,  nucl_plas 1  (predict for NP_196357.2)
Subcellular
localization
TargetP
mito 5  (predict for NP_001332333.1)
mito 5  (predict for NP_001332334.1)
mito 5  (predict for NP_001332335.1)
mito 5  (predict for NP_001332336.1)
mito 5  (predict for NP_001332337.1)
mito 5  (predict for NP_001332338.1)
mito 5  (predict for NP_001332339.1)
mito 5  (predict for NP_196357.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 2
ath03410 Base excision repair 2
Genes directly connected with AT5G07400 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.3 RAD5 DNA/RNA helicase protein [detail] 832338
6.2 MSH3 homolog of DNA mismatch repair protein MSH3 [detail] 828659
5.9 MEI1 transcription coactivator [detail] 844068
Coexpressed
gene list
[Coexpressed gene list for AT5G07400]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250630_at
250630_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250630_at
250630_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250630_at
250630_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830631    
Refseq ID (protein) NP_001332333.1 
NP_001332334.1 
NP_001332335.1 
NP_001332336.1 
NP_001332337.1 
NP_001332338.1 
NP_001332339.1 
NP_196357.2 


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