[←][→] ath   At5g07440 Gene
functional annotation
Function   glutamate dehydrogenase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006520 [list] [network] amino acid metabolic process  (418 genes)  IEA  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004352 [list] [network] glutamate dehydrogenase (NAD+) activity  (1 genes)  IDA  
GO:0004353 [list] [network] glutamate dehydrogenase [NAD(P)+] activity  (2 genes)  IDA  
GO:0050897 [list] [network] cobalt ion binding  (44 genes)  HDA  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0005524 [list] [network] ATP binding  (253 genes)  HDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  HDA  
KEGG ath00220 [list] [network] Arginine biosynthesis (36 genes)
ath00250 [list] [network] Alanine, aspartate and glutamate metabolism (51 genes)
ath00910 [list] [network] Nitrogen metabolism (43 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_001119183.1  NP_001119184.1  NP_196361.1 
BLAST NP_001119183.1  NP_001119184.1  NP_196361.1 
Orthologous [Ortholog page] gdh1 (sly)  GDH1 (gma)  GDH2 (gma)  GDH3 (ath)  GDH1 (ath)  LOC4330164 (osa)  LOC4334405 (osa)  LOC4336554 (osa)  LOC7456680 (ppo)  LOC7469881 (ppo)  LOC7482352 (ppo)  LOC11414500 (mtr)  LOC11433210 (mtr)  LOC18103847 (ppo)  LOC25493591 (mtr)  LOC25498983 (mtr)  LOC100682519 (tae)  LOC100777869 (gma)  LOC100789509 (gma)  LOC100793231 (gma)  LOC100801250 (gma)  LOC100801991 (gma)  LOC101246116 (sly)  LOC101252088 (sly)  LOC103828225 (bra)  LOC103845860 (bra)  LOC103847058 (bra)  LOC103850656 (bra)  LOC103855367 (bra)  LOC103855726 (bra)  LOC123046199 (tae)  LOC123054077 (tae)  LOC123105375 (tae)  LOC123113648 (tae)  LOC123189950 (tae)  LOC123427402 (hvu)  LOC123452653 (hvu) 
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  chlo 3  (predict for NP_001119183.1)
mito 5,  chlo_mito 4,  chlo 3  (predict for NP_001119184.1)
mito 5,  chlo_mito 4,  chlo 3  (predict for NP_196361.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001119183.1)
mito 6  (predict for NP_001119184.1)
mito 6  (predict for NP_196361.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00052 Galactose metabolism 2
ath00220 Arginine biosynthesis 2
ath00250 Alanine, aspartate and glutamate metabolism 2
ath00910 Nitrogen metabolism 2
ath01200 Carbon metabolism 2
Genes directly connected with GDH2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.6 STY46 ACT-like protein tyrosine kinase family protein [detail] 830003
8.6 ERD5 Methylenetetrahydrofolate reductase family protein [detail] 822833
7.7 GAT1_2.1 Class I glutamine amidotransferase-like superfamily protein [detail] 838069
7.2 CDPK2 calcium-dependent protein kinase 2 [detail] 840471
5.3 AT1G66760 MATE efflux family protein [detail] 842994
5.3 AT3G19390 Granulin repeat cysteine protease family protein [detail] 821473
5.3 GDH1 glutamate dehydrogenase 1 [detail] 831935
4.7 CINV1 cytosolic invertase 1 [detail] 840454
4.7 AT4G36820 calcium uniporter (DUF607) [detail] 829835
4.6 AT5G38710 Methylenetetrahydrofolate reductase family protein [detail] 833862
Coexpressed
gene list		 [Coexpressed gene list for GDH2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250580_at
250580_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250580_at
250580_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250580_at
250580_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830635      
Refseq ID (protein) NP_001119183.1 
NP_001119184.1 
NP_196361.1 


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