ATTED-II : GeneID search result

[←][→] ath AT5G07900 Gene

functional annotation

Function

Mitochondrial transcription termination factor family protein

GO BP

GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA
GO:0032502 [list] [network] developmental process	(3194 genes)	IBA

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

IBA ISM

GO MF

GO:0003690 [list] [network] double-stranded DNA binding

(343 genes)

IEA

KEGG

Protein

NP_568185.1

BLAST

NP_568185.1

Orthologous

[Ortholog page] AT1G21150 (ath) LOC4338741 (osa) LOC4338742 (osa) LOC4338789 (osa) LOC4343048 (osa) LOC7455788 (ppo) LOC7461323 (ppo) LOC7462501 (ppo) LOC7463619 (ppo) LOC7476813 (ppo) LOC7476818 (ppo) LOC7486723 (ppo) LOC7491317 (ppo) LOC11417325 (mtr) LOC11422280 (mtr) LOC11426162 (mtr) LOC11445633 (mtr) LOC11446118 (mtr) LOC25488104 (mtr) LOC25488107 (mtr) LOC25488108 (mtr) LOC25488149 (mtr) LOC25488150 (mtr) LOC25488151 (mtr) LOC25488153 (mtr) LOC25488156 (mtr) LOC25488159 (mtr) LOC25488160 (mtr) LOC25488161 (mtr) LOC25488162 (mtr) LOC25488163 (mtr) LOC25488164 (mtr) LOC25488166 (mtr) LOC25488169 (mtr) LOC25488171 (mtr) LOC25488214 (mtr) LOC25488215 (mtr) LOC25488217 (mtr) LOC25490579 (mtr) LOC25491192 (mtr) LOC25494089 (mtr) LOC100191160 (zma) LOC100193389 (zma) LOC100240766 (vvi) LOC100240848 (vvi) LOC100241175 (vvi) LOC100244540 (vvi) LOC100245862 (vvi) LOC100245941 (vvi) LOC100246295 (vvi) LOC100249689 (vvi) LOC100251002 (vvi) LOC100251440 (vvi) LOC100252260 (vvi) LOC100252802 (vvi) LOC100254077 (vvi) LOC100256384 (vvi) LOC100257952 (vvi) LOC100257975 (vvi) LOC100258309 (vvi) LOC100259193 (vvi) LOC100263451 (vvi) LOC100264327 (vvi) LOC100266539 (vvi) LOC100266863 (vvi) LOC100285792 (zma) LOC100775533 (gma) LOC100777030 (gma) LOC100778090 (gma) LOC100786128 (gma) LOC100786641 (gma) LOC100788793 (gma) LOC100788877 (gma) LOC100792944 (gma) LOC100806386 (gma) LOC100806920 (gma) LOC100813396 (gma) LOC101249514 (sly) LOC102661928 (gma) LOC102663105 (gma) LOC102663414 (gma) LOC102666622 (gma) LOC102666739 (gma) LOC102666855 (gma) LOC102667698 (gma) LOC102670177 (gma) LOC103858260 (bra) LOC103862768 (bra) LOC104879767 (vvi) LOC104879785 (vvi) LOC104879853 (vvi) LOC104881242 (vvi) LOC106799612 (gma) LOC109121413 (vvi) LOC109122921 (vvi) LOC112419020 (mtr)

Subcellular
localization
wolf

chlo 9, nucl 1, plas 1, nucl_plas 1

(predict for NP_568185.1)

Subcellular
localization
TargetP

chlo 4

(predict for NP_568185.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G07900 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.9	SVR7	pentatricopeptide (PPR) repeat-containing protein	[detail]	827333
7.8	AT5G52010	C2H2-like zinc finger protein	[detail]	835276
7.6	AT2G41950	DNA-directed RNA polymerase subunit beta	[detail]	818795
6.6	AT2G16800	high-affinity nickel-transport family protein	[detail]	816181
5.4	AT1G51080	golgin family A protein	[detail]	841530

Coexpressed
gene list

[Coexpressed gene list for AT5G07900]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250554_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250554_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250554_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830684
Refseq ID (protein)	NP_568185.1

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