[←][→] ath   At5g08020 Gene
functional annotation
Function   RPA70-kDa subunit B    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010224 [list] [network] response to UV-B  (75 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03030 [list] [network] DNA replication (43 genes)
ath03420 [list] [network] Nucleotide excision repair (62 genes)
ath03430 [list] [network] Mismatch repair (32 genes)
ath03440 [list] [network] Homologous recombination (60 genes)
Protein NP_196419.1 
BLAST NP_196419.1 
Orthologous [Ortholog page] RPA70D (ath)  LOC4332052 (osa)  LOC18105740 (ppo)  LOC25493890 (mtr)  LOC100777091 (gma)  LOC100808364 (gma)  LOC101255870 (sly)  LOC103837365 (bra)  LOC103855752 (bra)  LOC103860562 (bra)  LOC123085080 (tae)  LOC123092976 (tae)  LOC123098249 (tae)  LOC123449318 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  golg 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_196419.1)
Subcellular
localization
TargetP
other 6  (predict for NP_196419.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03440 Homologous recombination 5
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 4
Genes directly connected with RPA70B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
24.1 RPA70D Replication factor-A protein 1-like protein [detail] 836221
18.9 BARD1 breast cancer associated RING 1 [detail] 839329
16.9 AT3G14740 RING/FYVE/PHD zinc finger superfamily protein [detail] 820702
16.9 POLA3 DNA primase POLA3 [detail] 834193
15.8 CYCA3;1 Cyclin A3;1 [detail] 834324
15.3 AT4G28310 microtubule-associated protein [detail] 828946
15.2 ORC2 origin recognition complex second largest subunit 2 [detail] 818332
15.1 ABAP1 ARMADILLO BTB protein 1 [detail] 831145
15.1 AT3G27640 Transducin/WD40 repeat-like superfamily protein [detail] 822386
13.8 HMGB6 high-mobility group box 6 [detail] 832408
13.6 AT3G56870 uncharacterized protein [detail] 824854
13.2 RPA2 replicon protein A2 [detail] 816985
13.2 AT3G52630 Nucleic acid-binding, OB-fold-like protein [detail] 824429
13.1 CDT1A CDT1-like protein A [detail] 817684
12.8 ATXR6 TRITHORAX-RELATED PROTEIN 6 [detail] 832503
10.7 DEL1 DP-E2F-like 1 [detail] 823971
10.4 UBP21 ubiquitin-specific protease 21 [detail] 834717
10.1 AT5G38690 Zinc-finger domain of monoamine-oxidase A repressor R1 protein [detail] 833859
9.7 CDC6 cell division control 6 [detail] 817518
7.8 AT2G41450 N-acetyltransferase [detail] 818743
5.5 AT1G18090 5'-3' exonuclease family protein [detail] 838389
Coexpressed
gene list		 [Coexpressed gene list for RPA70B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250560_at
250560_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250560_at
250560_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250560_at
250560_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830696      
Refseq ID (protein) NP_196419.1 


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