[][] ath   AT5G08020 Gene
functional annotation
Function   RPA70-kDa subunit B
GO BP
GO:0007004 [list] [network] telomere maintenance via telomerase  (11 genes)  IBA  
GO:0006268 [list] [network] DNA unwinding involved in DNA replication  (18 genes)  IBA  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IBA  
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IBA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IBA  
GO:0010224 [list] [network] response to UV-B  (71 genes)  IMP  
GO:0006261 [list] [network] DNA-dependent DNA replication  (94 genes)  IBA  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IBA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA TAS  
GO CC
GO:0005662 [list] [network] DNA replication factor A complex  (8 genes)  IBA  
GO:0000784 [list] [network] nuclear chromosome, telomeric region  (23 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0043047 [list] [network] single-stranded telomeric DNA binding  (11 genes)  IBA  
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IBA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IBA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03030 [list] [network] DNA replication (50 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath03430 [list] [network] Mismatch repair (39 genes)
ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_196419.1 
BLAST NP_196419.1 
Orthologous [Ortholog page] RPA70D (ath)LOC4332052 (osa)LOC25493890 (mtr)LOC100255412 (vvi)LOC100273584 (zma)LOC100280726 (zma)LOC100777091 (gma)LOC100808364 (gma)LOC101255870 (sly)LOC103837365 (bra)LOC103855752 (bra)LOC103860562 (bra)
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  golg 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_196419.1)
Subcellular
localization
TargetP
other 6  (predict for NP_196419.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03440 Homologous recombination 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
Genes directly connected with RPA70B on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
23.9 RPA70D Replication factor-A protein 1-like protein [detail] 836221
18.5 BARD1 breast cancer associated RING 1 [detail] 839329
17.4 POLA3 DNA primase POLA3 [detail] 834193
17.3 AT3G14740 RING/FYVE/PHD zinc finger superfamily protein [detail] 820702
16.1 ABAP1 ARMADILLO BTB protein 1 [detail] 831145
14.8 CYCA3;1 Cyclin A3;1 [detail] 834324
13.9 RPA2 replicon protein A2 [detail] 816985
13.8 ORC2 origin recognition complex second largest subunit 2 [detail] 818332
13.7 AT3G56870 hypothetical protein [detail] 824854
13.0 CDT1A CDT1-like protein A [detail] 817684
12.5 HMGB6 high-mobility group box 6 [detail] 832408
11.6 DEL1 DP-E2F-like 1 [detail] 823971
10.0 UBP21 ubiquitin-specific protease 21 [detail] 834717
9.4 AT5G38690 Zinc-finger domain of monoamine-oxidase A repressor R1 protein [detail] 833859
9.3 CDC6 cell division control 6 [detail] 817518
8.1 MAP65-5 microtubule-associated protein 65-5 [detail] 818454
6.7 CTF7 protein CTF7 [detail] 829267
Coexpressed
gene list
[Coexpressed gene list for RPA70B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250560_at
250560_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250560_at
250560_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250560_at
250560_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830696    
Refseq ID (protein) NP_196419.1 


The preparation time of this page was 0.4 [sec].