[←][→] ath   AT5G08130 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein  
GO BP
GO:1902448 [list] [network] positive regulation of shade avoidance  (4 genes)  IMP  
GO:0009742 [list] [network] brassinosteroid mediated signaling pathway  (82 genes)  IGI  
GO:0006351 [list] [network] transcription, DNA-templated  (186 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA IEA ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (570 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IDA ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001119190.1  NP_001190257.1  NP_001190258.1  NP_001190259.1  NP_001318507.1  NP_001318508.1  NP_001330723.1  NP_001330724.1 
BLAST NP_001119190.1  NP_001190257.1  NP_001190258.1  NP_001190259.1  NP_001318507.1  NP_001318508.1  NP_001330723.1  NP_001330724.1 
Orthologous [Ortholog page] BIM3 (ath)  BIM2 (ath)  LOC4345899 (osa)  LOC4347359 (osa)  LOC7482242 (ppo)  LOC7483907 (ppo)  LOC11428511 (mtr)  LOC11431634 (mtr)  LOC25493922 (mtr)  LOC100191909 (zma)  LOC100243993 (vvi)  LOC100246122 (vvi)  LOC100246438 (vvi)  LOC100273866 (zma)  LOC100791730 (gma)  LOC100792653 (gma)  LOC100795416 (gma)  LOC100800999 (gma)  LOC100808016 (gma)  LOC100816055 (gma)  LOC101254588 (sly)  LOC101258066 (sly)  LOC101260613 (sly)  LOC101263596 (sly)  LOC101264225 (sly)  LOC103831309 (bra)  LOC103847129 (bra)  LOC103852546 (bra)  LOC103854916 (bra)  LOC103855759 (bra) 
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001119190.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001190257.1)
nucl 9  (predict for NP_001190258.1)
nucl 9  (predict for NP_001190259.1)
nucl 10  (predict for NP_001318507.1)
nucl 10  (predict for NP_001318508.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001330723.1)
nucl 9  (predict for NP_001330724.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for NP_001119190.1)
mito 5,  other 3  (predict for NP_001190257.1)
mito 4,  other 3  (predict for NP_001190258.1)
mito 4,  other 3  (predict for NP_001190259.1)
other 8  (predict for NP_001318507.1)
other 8  (predict for NP_001318508.1)
mito 5,  other 3  (predict for NP_001330723.1)
mito 4,  other 3  (predict for NP_001330724.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with BIM1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 PHYB phytochrome B [detail] 816394
5.6 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 837446
5.4 BIM2 BES1-interacting Myc-like protein 2 [detail] 843233
5.2 HB6 homeobox protein 6 [detail] 816775
5.2 AT1G01260 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 839545
Coexpressed
gene list		 [Coexpressed gene list for BIM1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250569_at
250569_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250569_at
250569_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250569_at
250569_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830708      
Refseq ID (protein) NP_001119190.1 
NP_001190257.1 
NP_001190258.1 
NP_001190259.1 
NP_001318507.1 
NP_001318508.1 
NP_001330723.1 
NP_001330724.1 


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