[←][→] ath   At5g08180 Gene
functional annotation
Function   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0031118 [list] [network] rRNA pseudouridine synthesis  (1 genes)  ISS  
GO CC
GO:0005732 [list] [network] sno(s)RNA-containing ribonucleoprotein complex  (71 genes)  ISS  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_001190260.1  NP_196435.1 
BLAST NP_001190260.1  NP_196435.1 
Orthologous [Ortholog page] LOC4330603 (osa)  LOC4340741 (osa)  LOC7485927 (ppo)  LOC11443631 (mtr)  LOC100305515 (gma)  LOC100499993 (gma)  LOC100804186 (gma)  LOC100810689 (gma)  LOC101268074 (sly)  LOC103847136 (bra)  LOC103850685 (bra)  LOC103855764 (bra)  LOC123128270 (tae)  LOC123138118 (tae)  LOC123145367 (tae)  LOC123403425 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  pero 1  (predict for NP_001190260.1)
cyto 6,  chlo 2,  pero 1  (predict for NP_196435.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190260.1)
other 9  (predict for NP_196435.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03008 Ribosome biogenesis in eukaryotes 6
ath03040 Spliceosome 3
Genes directly connected with AT5G08180 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.8 HDT4 histone deacetylase-related / HD-like protein [detail] 817331
11.6 RPL23AB ribosomal protein L23AB [detail] 824694
11.0 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 832138
10.8 ROC2 rotamase cyclophilin 2 [detail] 824773
10.5 AT1G08580 uncharacterized protein [detail] 837380
10.4 AT2G44860 Ribosomal protein L24e family protein [detail] 819095
10.3 AT2G43110 U3 containing 90S pre-ribosomal complex subunit [detail] 818913
7.7 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [detail] 828333
Coexpressed
gene list		 [Coexpressed gene list for AT5G08180]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250546_at
250546_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250546_at
250546_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250546_at
250546_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830714      
Refseq ID (protein) NP_001190260.1 
NP_196435.1 


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