[←][→] ath   At5g08280 Gene
functional annotation
Function   hydroxymethylbilane synthase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1900865 [list] [network] chloroplast RNA modification  (18 genes)  IMP  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  TAS  
GO:0006779 [list] [network] porphyrin-containing compound biosynthetic process  (73 genes)  TAS  
GO CC
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0004418 [list] [network] hydroxymethylbilane synthase activity  (1 genes)  IDA IMP  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00860 [list] [network] Porphyrin metabolism (53 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_196445.1 
BLAST NP_196445.1 
Orthologous [Ortholog page] LOC543063 (tae)  LOC4328432 (osa)  LOC7457180 (ppo)  LOC7486372 (ppo)  LOC11441634 (mtr)  LOC100779132 (gma)  LOC100810357 (gma)  LOC100812733 (gma)  LOC100818391 (gma)  LOC101257684 (sly)  LOC103847145 (bra)  LOC103850687 (bra)  LOC103855770 (bra)  LOC123136516 (tae)  LOC123144012 (tae)  LOC123401111 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_196445.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_196445.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 11
ath01240 Biosynthesis of cofactors 10
Genes directly connected with HEMC on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.7 HEME2 Uroporphyrinogen decarboxylase [detail] 818644
12.3 LIN2 Coproporphyrinogen III oxidase [detail] 839489
11.6 HEME1 Uroporphyrinogen decarboxylase [detail] 820722
10.8 HEMB1 Aldolase superfamily protein [detail] 843310
9.5 PPOX Flavin containing amine oxidoreductase family [detail] 827991
8.9 GSA1 glutamate-1-semialdehyde-2,1-aminomutase [detail] 836476
6.8 EMB2759 embryo defective 2759 [detail] 836425
Coexpressed
gene list		 [Coexpressed gene list for HEMC]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246033_at
246033_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246033_at
246033_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246033_at
246033_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830724      
Refseq ID (protein) NP_196445.1 


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