[←][→] ath   At5g08420 Gene
functional annotation
Function   RNA-binding KH domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_196459.1 
BLAST NP_196459.1 
Orthologous [Ortholog page] LOC4348775 (osa)  LOC7462572 (ppo)  LOC9270811 (osa)  LOC11435195 (mtr)  LOC100783800 (gma)  LOC100816856 (gma)  LOC101259018 (sly)  LOC103847151 (bra)  LOC103850699 (bra)  LOC123061730 (tae)  LOC123070363 (tae)  LOC123078815 (tae)  LOC123444261 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for NP_196459.1)
Subcellular
localization
TargetP
other 9  (predict for NP_196459.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G08420 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.5 AT2G40430 Nop53 protein [detail] 818636
8.3 AT4G08310 DNA ligase [detail] 826385
7.7 AT2G40660 Nucleic acid-binding, OB-fold-like protein [detail] 818661
7.6 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 824818
6.9 AT5G46550 DNA-binding bromodomain-containing protein [detail] 834698
4.8 AT5G66820 uncharacterized protein [detail] 836816
Coexpressed
gene list		 [Coexpressed gene list for AT5G08420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246060_at
246060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246060_at
246060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246060_at
246060_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830741      
Refseq ID (protein) NP_196459.1 


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