[←][→] ath   AT5G08420 Gene
functional annotation
Function   RNA-binding KH domain-containing protein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_196459.1 
BLAST NP_196459.1 
Orthologous [Ortholog page] LOC4348775 (osa)  LOC7462572 (ppo)  LOC9270811 (osa)  LOC11435195 (mtr)  LOC100245609 (vvi)  LOC100783800 (gma)  LOC100816856 (gma)  LOC101259018 (sly)  LOC103847151 (bra)  LOC103850699 (bra)  LOC107521945 (zma) 
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for NP_196459.1)
Subcellular
localization
TargetP
other 9  (predict for NP_196459.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03040 Spliceosome 2
Genes directly connected with AT5G08420 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 AT2G40430 Nop53 protein [detail] 818636
8.4 AT2G16860 GCIP-interacting family protein [detail] 816187
8.3 AT4G08310 DNA ligase [detail] 826385
8.0 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 824818
Coexpressed
gene list		 [Coexpressed gene list for AT5G08420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246060_at
246060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246060_at
246060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246060_at
246060_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830741      
Refseq ID (protein) NP_196459.1 


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