ATTED-II : GeneID search result

[←][→] ath AT5G09730 Gene

functional annotation

Function

beta-xylosidase 3

GO BP

GO:0031222 [list] [network] arabinan catabolic process	(8 genes)	IBA IDA
GO:0045493 [list] [network] xylan catabolic process	(13 genes)	IBA

GO CC

GO:0009505 [list] [network] plant-type cell wall	(220 genes)	IBA
GO:0005576 [list] [network] extracellular region	(3363 genes)	IEA ISM

GO MF

GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity	(12 genes)	IBA
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity	(12 genes)	IBA IDA

KEGG

ath00520 [list] [network] Amino sugar and nucleotide sugar metabolism (131 genes)

Protein

NP_196535.1

BLAST

NP_196535.1

Orthologous

[Ortholog page] XYL1 (sly) LOC543515 (sly) XYL4 (ath) LOC4337166 (osa) LOC7473018 (ppo) LOC11424908 (mtr) LOC25493289 (mtr) LOC100247929 (vvi) LOC100262089 (vvi) LOC100279996 (zma) LOC100786744 (gma) LOC100792948 (gma) LOC100798939 (gma) LOC103831146 (bra) LOC103837535 (bra) LOC103847226 (bra) LOC103855248 (bra) LOC103873882 (bra)

Subcellular
localization
wolf

plas 4, E.R. 3, chlo 1, cyto_E.R. 1

(predict for NP_196535.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_196535.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with BXL3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.1	AT4G04595		[detail]	28719574
7.8	AT2G00670		[detail]	28717476
7.2	AT4G04565		[detail]	28719572
6.6	AT2G31141	hypothetical protein	[detail]	6240467
5.7	AT3G63052	hypothetical protein	[detail]	6240894

Coexpressed
gene list

[Coexpressed gene list for BXL3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250499_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250499_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250499_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830833
Refseq ID (protein)	NP_196535.1

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