[][] ath   AT5G10450 Gene
functional annotation
Function   G-box regulating factor 6
GO BP
GO:0050826 [list] [network] response to freezing  (28 genes)  IMP  
GO:0045732 [list] [network] positive regulation of protein catabolic process  (45 genes)  IMP  
GO:0009742 [list] [network] brassinosteroid mediated signaling pathway  (82 genes)  IPI  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IGI  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0045309 [list] [network] protein phosphorylated amino acid binding  (16 genes)  TAS  
GO:0019904 [list] [network] protein domain specific binding  (17 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001031868.1  NP_001190275.1  NP_001190276.1  NP_568229.1 
BLAST NP_001031868.1  NP_001190275.1  NP_001190276.1  NP_568229.1 
Orthologous [Ortholog page] tft10 (sly)GF14B (gma)GRF8 (ath)LOC7467189 (ppo)LOC7468865 (ppo)LOC11420882 (mtr)LOC100250873 (vvi)SGF14J (gma)LOC100854545 (vvi)TFT1 (sly)LOC103837581 (bra)LOC103850322 (bra)LOC103855867 (bra)LOC103873976 (bra)
Subcellular
localization
wolf
chlo 4,  plas 4,  nucl_plas 4,  nucl 2,  chlo_mito 2  (predict for NP_001031868.1)
chlo 4,  plas 4,  nucl_plas 4,  nucl 2,  chlo_mito 2  (predict for NP_001190275.1)
plas 4,  nucl_plas 4,  nucl 2,  cyto 2,  chlo 1  (predict for NP_001190276.1)
nucl_plas 4,  plas 4,  chlo 3,  nucl 3  (predict for NP_568229.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001031868.1)
other 6  (predict for NP_001190275.1)
other 6  (predict for NP_001190276.1)
other 6  (predict for NP_568229.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with GRF6 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.9 GRF8 general regulatory factor 8 [detail] 836668
7.1 AT3G51730 saposin B domain-containing protein [detail] 824336
7.0 UBC1 ubiquitin carrier protein 1 [detail] 838002
5.8 AT5G10460 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 830910
5.7 GRF9 general regulatory factor 9 [detail] 818859
4.7 AT5G43830 aluminum induced protein with YGL and LRDR motifs [detail] 834405
Coexpressed
gene list
[Coexpressed gene list for GRF6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250439_at
250439_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250439_at
250439_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250439_at
250439_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830909    
Refseq ID (protein) NP_001031868.1 
NP_001190275.1 
NP_001190276.1 
NP_568229.1 


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