functional annotation |
Function |
Protein-tyrosine phosphatase-like, PTPLA |
|
GO BP |
GO:0050732 [list] [network] negative regulation of peptidyl-tyrosine phosphorylation
|
(1 genes)
|
IMP
|
|
GO:0048640 [list] [network] negative regulation of developmental growth
|
(11 genes)
|
IMP
|
|
GO:0042761 [list] [network] very long-chain fatty acid biosynthetic process
|
(20 genes)
|
IMP
|
|
GO:0051302 [list] [network] regulation of cell division
|
(60 genes)
|
IMP
|
|
GO:0030154 [list] [network] cell differentiation
|
(695 genes)
|
IMP
|
|
GO:0007275 [list] [network] multicellular organism development
|
(2714 genes)
|
IEA
|
|
|
GO CC |
|
GO MF |
GO:0080023 [list] [network] 3R-hydroxyacyl-CoA dehydratase activity
|
(2 genes)
|
IGI
|
|
GO:0102158 [list] [network] very-long-chain 3-hydroxyacyl-CoA dehydratase activity
|
(2 genes)
|
IEA
|
|
GO:0102343 [list] [network] 3-hydroxy-arachidoyl-CoA dehydratase activity
|
(2 genes)
|
IEA
|
|
GO:0102344 [list] [network] 3-hydroxy-behenoyl-CoA dehydratase activity
|
(2 genes)
|
IEA
|
|
GO:0102345 [list] [network] 3-hydroxy-lignoceroyl-CoA dehydratase activity
|
(2 genes)
|
IEA
|
|
GO:0004725 [list] [network] protein tyrosine phosphatase activity
|
(23 genes)
|
ISS
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
KEGG |
ath00062 [list] [network] Fatty acid elongation (35 genes) |
|
ath01040 [list] [network] Biosynthesis of unsaturated fatty acids (24 genes) |
|
ath01212 [list] [network] Fatty acid metabolism (69 genes) |
|
Protein |
NP_001078566.1
NP_001190277.1
NP_196610.2
|
BLAST |
NP_001078566.1
NP_001190277.1
NP_196610.2
|
Orthologous |
[Ortholog page]
LOC4335343 (osa)
LOC7480190 (ppo)
LOC25502888 (mtr)
LOC100261741 (vvi)
LOC100274548 (zma)
LOC100527150 (gma)
LOC100818356 (gma)
LOC101245050 (sly)
LOC103846802 (bra)
LOC103855870 (bra)
LOC111946217 (osa)
|
Subcellular localization wolf |
chlo 3,
cyto 2,
nucl 1,
plas 1,
nucl_plas 1,
cyto_E.R. 1
|
(predict for NP_001078566.1)
|
vacu 4,
extr 2,
E.R._vacu 2,
chlo 1
|
(predict for NP_001190277.1)
|
vacu 4,
extr 2,
chlo 1,
cyto 1,
mito 1,
plas 1,
E.R. 1,
chlo_mito 1,
E.R._plas 1,
mito_plas 1,
cyto_E.R. 1,
cyto_plas 1
|
(predict for NP_196610.2)
|
|
Subcellular localization TargetP |
other 8
|
(predict for NP_001078566.1)
|
scret 7,
mito 6
|
(predict for NP_001190277.1)
|
scret 8,
mito 5
|
(predict for NP_196610.2)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath00062 |
Fatty acid elongation |
5 |
|
ath01212 |
Fatty acid metabolism |
4 |
|
ath00564 |
Glycerophospholipid metabolism |
3 |
|
ath01040 |
Biosynthesis of unsaturated fatty acids |
3 |
|
ath00561 |
Glycerolipid metabolism |
2 |
|
Genes directly connected with PAS2 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
16.3 |
CER10 |
3-oxo-5-alpha-steroid 4-dehydrogenase family protein |
[detail] |
824702 |
13.7 |
KCR1 |
beta-ketoacyl reductase 1 |
[detail] |
843098 |
7.4 |
GPAT4 |
glycerol-3-phosphate acyltransferase 4 |
[detail] |
839297 |
7.1 |
GPDHC1 |
6-phosphogluconate dehydrogenase family protein |
[detail] |
818752 |
5.0 |
AT1G19970 |
ER lumen protein retaining receptor family protein |
[detail] |
838586 |
|
Coexpressed gene list |
[Coexpressed gene list for PAS2]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
250428_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
250428_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
250428_at
X axis is samples (xls file), and Y axis is log-expression.
|