[][] ath   AT5G10480 Gene
functional annotation
Function   Protein-tyrosine phosphatase-like, PTPLA
GO BP
GO:0050732 [list] [network] negative regulation of peptidyl-tyrosine phosphorylation  (1 genes)  IMP  
GO:0048640 [list] [network] negative regulation of developmental growth  (11 genes)  IMP  
GO:0042761 [list] [network] very long-chain fatty acid biosynthetic process  (20 genes)  IMP  
GO:0051302 [list] [network] regulation of cell division  (60 genes)  IMP  
GO:0030154 [list] [network] cell differentiation  (695 genes)  IMP  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0009923 [list] [network] fatty acid elongase complex  (2 genes)  IPI  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA IEA  
GO MF
GO:0080023 [list] [network] 3R-hydroxyacyl-CoA dehydratase activity  (2 genes)  IGI  
GO:0102158 [list] [network] very-long-chain 3-hydroxyacyl-CoA dehydratase activity  (2 genes)  IEA  
GO:0102343 [list] [network] 3-hydroxy-arachidoyl-CoA dehydratase activity  (2 genes)  IEA  
GO:0102344 [list] [network] 3-hydroxy-behenoyl-CoA dehydratase activity  (2 genes)  IEA  
GO:0102345 [list] [network] 3-hydroxy-lignoceroyl-CoA dehydratase activity  (2 genes)  IEA  
GO:0004725 [list] [network] protein tyrosine phosphatase activity  (23 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00062 [list] [network] Fatty acid elongation (35 genes)
ath01040 [list] [network] Biosynthesis of unsaturated fatty acids (24 genes)
ath01212 [list] [network] Fatty acid metabolism (69 genes)
Protein NP_001078566.1  NP_001190277.1  NP_196610.2 
BLAST NP_001078566.1  NP_001190277.1  NP_196610.2 
Orthologous [Ortholog page] LOC4335343 (osa)LOC7480190 (ppo)LOC25502888 (mtr)LOC100261741 (vvi)LOC100274548 (zma)LOC100527150 (gma)LOC100818356 (gma)LOC101245050 (sly)LOC103846802 (bra)LOC103855870 (bra)LOC111946217 (osa)
Subcellular
localization
wolf
chlo 3,  cyto 2,  nucl 1,  plas 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_001078566.1)
vacu 4,  extr 2,  E.R._vacu 2,  chlo 1  (predict for NP_001190277.1)
vacu 4,  extr 2,  chlo 1,  cyto 1,  mito 1,  plas 1,  E.R. 1,  chlo_mito 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_196610.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001078566.1)
scret 7,  mito 6  (predict for NP_001190277.1)
scret 8,  mito 5  (predict for NP_196610.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 5
ath01212 Fatty acid metabolism 4
ath00564 Glycerophospholipid metabolism 3
ath01040 Biosynthesis of unsaturated fatty acids 3
ath00561 Glycerolipid metabolism 2
Genes directly connected with PAS2 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
16.3 CER10 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [detail] 824702
13.7 KCR1 beta-ketoacyl reductase 1 [detail] 843098
7.4 GPAT4 glycerol-3-phosphate acyltransferase 4 [detail] 839297
7.1 GPDHC1 6-phosphogluconate dehydrogenase family protein [detail] 818752
5.0 AT1G19970 ER lumen protein retaining receptor family protein [detail] 838586
Coexpressed
gene list
[Coexpressed gene list for PAS2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250428_at
250428_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250428_at
250428_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250428_at
250428_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830912    
Refseq ID (protein) NP_001078566.1 
NP_001190277.1 
NP_196610.2 


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