[←][→] ath   AT5G10800 Gene
functional annotation
Function   RNA recognition motif (RRM)-containing protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001331098.1  NP_001331099.1  NP_196641.2 
BLAST NP_001331098.1  NP_001331099.1  NP_196641.2 
Orthologous [Ortholog page] RRC1 (ath)  LOC4328504 (osa)  LOC7489161 (ppo)  LOC11440509 (mtr)  LOC100262865 (vvi)  LOC100304259 (zma)  LOC100775729 (gma)  LOC100776093 (gma)  LOC101261199 (sly)  LOC103626713 (zma)  LOC103837075 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for NP_001331098.1)
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_001331099.1)
nucl 7,  cyto 3  (predict for NP_196641.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001331098.1)
other 8,  mito 3  (predict for NP_001331099.1)
other 9  (predict for NP_196641.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G10800 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.2 AT4G29990 Leucine-rich repeat transmembrane protein kinase protein [detail] 829122
5.0 AT2G24350 RNA binding (RRM/RBD/RNP motifs) family protein [detail] 816971
4.5 AT3G04160 U11/U12 small nuclear ribonucleoprotein [detail] 819571
3.9 AT1G70430 Protein kinase superfamily protein [detail] 843379
2.3 AT3G00470 [detail] 28718395
Coexpressed
gene list		 [Coexpressed gene list for AT5G10800]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250447_at
250447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250447_at
250447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250447_at
250447_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830947      
Refseq ID (protein) NP_001331098.1 
NP_001331099.1 
NP_196641.2 


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