functional annotation |
Function |
DEAD/DEAH box RNA helicase family protein |
|
GO BP |
GO:0051028 [list] [network] mRNA transport
|
(63 genes)
|
IEA
|
|
|
GO CC |
|
GO MF |
|
KEGG |
ath03013 [list] [network] RNA transport (171 genes) |
|
ath03015 [list] [network] mRNA surveillance pathway (115 genes) |
|
ath03040 [list] [network] Spliceosome (192 genes) |
|
Protein |
NP_001154706.1
NP_001154707.1
NP_568245.1
|
BLAST |
NP_001154706.1
NP_001154707.1
NP_568245.1
|
Orthologous |
[Ortholog page]
UAP56a (ath)
LOC4326192 (osa)
LOC4326193 (osa)
LOC7468631 (ppo)
LOC11424505 (mtr)
LOC11431965 (mtr)
LOC25491302 (mtr)
LOC100250852 (vvi)
LOC100268003 (vvi)
LOC100273717 (zma)
LOC100384654 (zma)
LOC100785358 (gma)
LOC100796232 (gma)
LOC100799082 (gma)
LOC100808957 (gma)
LOC101259772 (sly)
LOC101261336 (sly)
LOC103846744 (bra)
LOC103846746 (bra)
LOC103850757 (bra)
LOC103850759 (bra)
LOC103855903 (bra)
|
Subcellular localization wolf |
chlo 3,
plas 2,
nucl 1,
chlo_mito 1,
cysk_nucl 1,
E.R._plas 1,
mito_plas 1,
cyto_plas 1
|
(predict for NP_001154706.1)
|
cyto 6,
nucl 3,
cyto_pero 3,
cyto_E.R. 3,
cyto_plas 3
|
(predict for NP_001154707.1)
|
cyto 6,
nucl 2,
extr 1,
cysk_nucl 1
|
(predict for NP_568245.1)
|
|
Subcellular localization TargetP |
other 9
|
(predict for NP_001154706.1)
|
other 9
|
(predict for NP_001154707.1)
|
other 9
|
(predict for NP_568245.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath03010 |
Ribosome |
11 |
|
ath03013 |
RNA transport |
3 |
|
Genes directly connected with UAP56b on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
7.6 |
PGY1 |
Ribosomal protein L1p/L10e family |
[detail] |
817299 |
7.3 |
EIF2 GAMMA |
eukaryotic translation initiation factor 2 gamma subunit |
[detail] |
839238 |
7.2 |
AT5G58420 |
Ribosomal protein S4 (RPS4A) family protein |
[detail] |
835955 |
6.5 |
UAP56a |
DEAD/DEAH box RNA helicase family protein |
[detail] |
830986 |
5.5 |
TOC34 |
translocon at the outer envelope membrane of chloroplasts 34 |
[detail] |
830382 |
|
Coexpressed gene list |
[Coexpressed gene list for UAP56b]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|