[←][→] ath   AT5G11200 Gene
functional annotation
Function   DEAD/DEAH box RNA helicase family protein  
GO BP
GO:0051028 [list] [network] mRNA transport  (63 genes)  IEA  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003725 [list] [network] double-stranded RNA binding  (16 genes)  IDA  
GO:0003697 [list] [network] single-stranded DNA binding  (75 genes)  IDA  
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IDA  
GO:0016887 [list] [network] ATPase activity  (507 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03015 [list] [network] mRNA surveillance pathway (115 genes)
ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001154706.1  NP_001154707.1  NP_568245.1 
BLAST NP_001154706.1  NP_001154707.1  NP_568245.1 
Orthologous [Ortholog page] UAP56a (ath)  LOC4326192 (osa)  LOC4326193 (osa)  LOC7468631 (ppo)  LOC11424505 (mtr)  LOC11431965 (mtr)  LOC25491302 (mtr)  LOC100250852 (vvi)  LOC100268003 (vvi)  LOC100273717 (zma)  LOC100384654 (zma)  LOC100785358 (gma)  LOC100796232 (gma)  LOC100799082 (gma)  LOC100808957 (gma)  LOC101259772 (sly)  LOC101261336 (sly)  LOC103846744 (bra)  LOC103846746 (bra)  LOC103850757 (bra)  LOC103850759 (bra)  LOC103855903 (bra) 
Subcellular
localization
wolf
chlo 3,  plas 2,  nucl 1,  chlo_mito 1,  cysk_nucl 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001154706.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001154707.1)
cyto 6,  nucl 2,  extr 1,  cysk_nucl 1  (predict for NP_568245.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001154706.1)
other 9  (predict for NP_001154707.1)
other 9  (predict for NP_568245.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03013 RNA transport 3
Genes directly connected with UAP56b on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 PGY1 Ribosomal protein L1p/L10e family [detail] 817299
7.3 EIF2 GAMMA eukaryotic translation initiation factor 2 gamma subunit [detail] 839238
7.2 AT5G58420 Ribosomal protein S4 (RPS4A) family protein [detail] 835955
6.5 UAP56a DEAD/DEAH box RNA helicase family protein [detail] 830986
5.5 TOC34 translocon at the outer envelope membrane of chloroplasts 34 [detail] 830382
Coexpressed
gene list		 [Coexpressed gene list for UAP56b]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 830990      
Refseq ID (protein) NP_001154706.1 
NP_001154707.1 
NP_568245.1 


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