ATTED-II : GeneID search result

[←][→] ath At5g11680 Gene

functional annotation

Function

classical AGP protein

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0005829 [list] [network] cytosol	(2559 genes)	ISS
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

KEGG

Protein

NP_196729.1

BLAST

NP_196729.1

Orthologous

[Ortholog page] LOC4347553 (osa) LOC7477771 (ppo) LOC7497564 (ppo) LOC25501534 (mtr) LOC100500660 (gma) LOC100526945 (gma) LOC101252472 (sly) LOC103855921 (bra) LOC123104373 (tae) LOC123112655 (tae) LOC123122148 (tae) LOC123399858 (hvu)

Subcellular
localization
wolf

cyto 6, extr 1, pero 1, nucl 1, E.R. 1

(predict for NP_196729.1)

Subcellular
localization
TargetP

other 6

(predict for NP_196729.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	5
ath04120	Ubiquitin mediated proteolysis	2
ath04141	Protein processing in endoplasmic reticulum	2
ath04075	Plant hormone signal transduction	2

Genes directly connected with AT5G11680 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.6	VPS2.1	SNF7 family protein	[detail]	815211
7.4	GBF4	G-box binding factor 4	[detail]	839356
7.1	AT5G06260	TLD-domain containing nucleolar protein	[detail]	830513
6.3	UBC30	ubiquitin-conjugating enzyme 30	[detail]	835714

Coexpressed
gene list

[Coexpressed gene list for AT5G11680]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250332_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250332_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250332_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831040
Refseq ID (protein)	NP_196729.1

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