[←][→] ath   AT5G11680 Gene
functional annotation
Function   classical AGP protein  
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  ISS  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0031490 [list] [network] chromatin DNA binding  (27 genes)  IBA  
GO:0003713 [list] [network] transcription coactivator activity  (36 genes)  IBA  
KEGG
Protein NP_196729.1 
BLAST NP_196729.1 
Orthologous [Ortholog page] LOC4347553 (osa)  LOC7477771 (ppo)  LOC25501534 (mtr)  LOC100246511 (vvi)  LOC100281165 (zma)  LOC100500660 (gma)  LOC100526945 (gma)  LOC101252472 (sly)  LOC101264205 (sly)  LOC103633000 (zma)  LOC103648406 (zma)  LOC103855921 (bra) 
Subcellular
localization
wolf
cyto 6,  extr 1,  pero 1,  nucl 1,  E.R. 1  (predict for NP_196729.1)
Subcellular
localization
TargetP
other 6  (predict for NP_196729.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04144 Endocytosis 3
ath04120 Ubiquitin mediated proteolysis 2
ath04130 SNARE interactions in vesicular transport 2
ath04075 Plant hormone signal transduction 2
Genes directly connected with AT5G11680 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 VPS2.1 SNF7 family protein [detail] 815211
6.9 UBC30 ubiquitin-conjugating enzyme 30 [detail] 835714
6.6 AT5G06260 TLD-domain containing nucleolar protein [detail] 830513
6.4 GBF4 G-box binding factor 4 [detail] 839356
6.1 UBC33 ubiquitin-conjugating enzyme 33 [detail] 835111
Coexpressed
gene list		 [Coexpressed gene list for AT5G11680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250332_at
250332_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250332_at
250332_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250332_at
250332_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831040      
Refseq ID (protein) NP_196729.1 


The preparation time of this page was 0.2 [sec].