[←][→] ath   At5g12250 Gene
functional annotation
Function   beta-6 tubulin    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0007017 [list] [network] microtubule-based process  (134 genes)  ISS  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO CC
GO:0015630 [list] [network] microtubule cytoskeleton  (166 genes)  ISS  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0005200 [list] [network] structural constituent of cytoskeleton  (24 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath04145 [list] [network] Phagosome (83 genes)
Protein NP_196786.1 
BLAST NP_196786.1 
Orthologous [Ortholog page] LOC543257 (tae)  LOC543258 (tae)  LOC543260 (tae)  LOC543261 (tae)  LOC543262 (tae)  LOC543473 (tae)  TUBB3 (gma)  TUBB (gma)  TUB (sly)  TUB7 (ath)  TUB9 (ath)  TUB8 (ath)  TUB4 (ath)  TUB2 (ath)  TUB3 (ath)  TUB5 (ath)  TUB1 (ath)  LOC4326917 (osa)  LOC4327550 (osa)  LOC4328420 (osa)  LOC4331315 (osa)  LOC4333632 (osa)  LOC4334309 (osa)  LOC4338790 (osa)  LOC4341810 (osa)  LOC7454884 (ppo)  LOC7462497 (ppo)  LOC7464075 (ppo)  LOC7465852 (ppo)  LOC7465861 (ppo)  LOC7468015 (ppo)  LOC7471684 (ppo)  LOC7472769 (ppo)  LOC7477677 (ppo)  LOC7478050 (ppo)  LOC7479116 (ppo)  LOC7479658 (ppo)  LOC7480106 (ppo)  LOC7481503 (ppo)  LOC7486729 (ppo)  LOC7487287 (ppo)  LOC7487442 (ppo)  LOC11414871 (mtr)  LOC11415767 (mtr)  LOC11422693 (mtr)  LOC11425110 (mtr)  LOC11437601 (mtr)  LOC11438618 (mtr)  LOC11439086 (mtr)  LOC11442516 (mtr)  LOC18095120 (ppo)  LOC18103507 (ppo)  LOC18108966 (ppo)  LOC25491473 (mtr)  LOC25493371 (mtr)  TUBB1 (gma)  LOC100781043 (gma)  LOC100781525 (gma)  LOC100784236 (gma)  LOC100788253 (gma)  LOC100793406 (gma)  LOC100797652 (gma)  LOC100797894 (gma)  LOC100798849 (gma)  LOC100801608 (gma)  LOC100801893 (gma)  TUBB2 (gma)  LOC100816898 (gma)  LOC100818878 (gma)  LOC100819408 (gma)  LOC100819883 (gma)  LOC101246411 (sly)  LOC101248630 (sly)  LOC101248956 (sly)  LOC101251552 (sly)  LOC101252240 (sly)  LOC101253952 (sly)  LOC101262621 (sly)  LOC101262728 (sly)  LOC101265829 (sly)  LOC103827910 (bra)  LOC103832026 (bra)  LOC103834176 (bra)  LOC103839187 (bra)  LOC103846653 (bra)  LOC103848440 (bra)  LOC103858467 (bra)  LOC103861207 (bra)  LOC103864974 (bra)  LOC103867806 (bra)  LOC103868027 (bra)  LOC103873285 (bra)  LOC103873591 (bra)  LOC103873913 (bra)  LOC103874246 (bra)  LOC103874709 (bra)  LOC112324443 (ppo)  LOC121173566 (gma)  LOC123038379 (tae)  LOC123055669 (tae)  LOC123062345 (tae)  LOC123071115 (tae)  LOC123087340 (tae)  LOC123093905 (tae)  LOC123095632 (tae)  LOC123099112 (tae)  LOC123102397 (tae)  LOC123105255 (tae)  LOC123105434 (tae)  LOC123106070 (tae)  LOC123113513 (tae)  LOC123132419 (tae)  LOC123132824 (tae)  LOC123136498 (tae)  LOC123137750 (tae)  LOC123149111 (tae)  LOC123156491 (tae)  LOC123168888 (tae)  LOC123182447 (tae)  LOC123405951 (hvu)  LOC123408330 (hvu)  LOC123413646 (hvu)  LOC123442982 (hvu)  LOC123444074 (hvu)  LOC123444643 (hvu)  LOC123446959 (hvu)  LOC123449966 (hvu)  LOC123452511 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  vacu 1,  pero 1,  cysk 1  (predict for NP_196786.1)
Subcellular
localization
TargetP
other 8  (predict for NP_196786.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 7
Genes directly connected with TUB6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.4 TUB8 tubulin beta 8 [detail] 832451
8.3 GH9B7 glycosyl hydrolase 9B7 [detail] 843902
7.9 TUB3 tubulin beta chain 3 [detail] 836391
7.4 DWF1 cell elongation protein / DWARF1 / DIMINUTO (DIM) [detail] 821519
6.7 TUB1 tubulin beta-1 chain [detail] 843911
6.2 SAH7 Pollen Ole e 1 allergen and extensin family protein [detail] 826435
5.9 BGAL5 beta-galactosidase 5 [detail] 841080
5.9 TET7 tetraspanin7 [detail] 828920
Coexpressed
gene list		 [Coexpressed gene list for TUB6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250317_at
250317_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250317_at
250317_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250317_at
250317_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831100      
Refseq ID (protein) NP_196786.1 


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