[←][→] ath   AT5G12410 Gene
functional annotation
Function   THUMP domain-containing protein  
GO BP
GO:0006400 [list] [network] tRNA modification  (63 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG
Protein NP_568274.1 
BLAST NP_568274.1 
Orthologous [Ortholog page] LOC4350746 (osa)  LOC11436214 (mtr)  LOC100244787 (vvi)  LOC100282152 (zma)  LOC100776466 (gma)  LOC100812892 (gma)  LOC101265890 (sly)  LOC103846640 (bra)  LOC103855976 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_568274.1)
Subcellular
localization
TargetP
other 7  (predict for NP_568274.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G12410 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 AT3G15970 NUP50 (Nucleoporin 50 kDa) protein [detail] 820841
8.2 IMB1 Transcription factor GTE6 [detail] 818055
8.2 DDL SMAD/FHA domain-containing protein [detail] 821601
6.9 MAP2B methionine aminopeptidase 2B [detail] 825169
5.4 AT1G15810 S15/NS1, RNA-binding protein [detail] 838150
Coexpressed
gene list		 [Coexpressed gene list for AT5G12410]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245180_at
245180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245180_at
245180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245180_at
245180_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831116      
Refseq ID (protein) NP_568274.1 


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