[←][→] ath   At5g12980 Gene
functional annotation
Function   Cell differentiation, Rcd1-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_196802.1 
BLAST NP_196802.1 
Orthologous [Ortholog page] AT3G20800 (ath)  LOC7470819 (ppo)  LOC7483613 (ppo)  LOC9272009 (osa)  LOC11407593 (mtr)  LOC11424425 (mtr)  LOC25488987 (mtr)  LOC100784529 (gma)  LOC100792752 (gma)  LOC100792784 (gma)  LOC100801266 (gma)  LOC101249588 (sly)  LOC101260874 (sly)  LOC101263473 (sly)  LOC101265516 (sly)  LOC102664939 (gma)  LOC103835726 (bra)  LOC103846614 (bra)  LOC103855988 (bra)  LOC103869276 (bra)  LOC112329112 (ppo)  LOC123039908 (tae)  LOC123046458 (tae)  LOC123050993 (tae)  LOC123054307 (tae)  LOC123086062 (tae)  LOC123105303 (tae)  LOC123184189 (tae)  LOC123190192 (tae)  LOC123427622 (hvu)  LOC123431497 (hvu)  LOC123452562 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl_plas 2,  nucl 1,  plas 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_196802.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_196802.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
ath03018 RNA degradation 2
Genes directly connected with AT5G12980 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.8 AT1G68650 Uncharacterized protein family (UPF0016) [detail] 843195
5.7 GTF2H2 general transcription factor II H2 [detail] 839332
5.4 AT5G59400 PGR5-like A protein [detail] 836059
Coexpressed
gene list		 [Coexpressed gene list for AT5G12980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250270_at
250270_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250270_at
250270_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250270_at
250270_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831138      
Refseq ID (protein) NP_196802.1 


The preparation time of this page was 0.2 [sec].