| functional annotation |
| Function |
Protein kinase superfamily protein |
|
| GO BP |
|
GO:0010082 [list] [network] regulation of root meristem growth
|
(27 genes)
|
IGI
|
 |
|
GO:0010075 [list] [network] regulation of meristem growth
|
(54 genes)
|
IDA
IMP
|
|
|
GO:0002229 [list] [network] defense response to oomycetes
|
(67 genes)
|
IBA
|
|
|
GO:0010073 [list] [network] meristem maintenance
|
(133 genes)
|
IGI
|
|
|
GO:0009909 [list] [network] regulation of flower development
|
(157 genes)
|
IMP
|
|
|
GO:0042742 [list] [network] defense response to bacterium
|
(399 genes)
|
IBA
|
|
|
GO:0006468 [list] [network] protein phosphorylation
|
(921 genes)
|
IEA
|
|
|
GO:0006952 [list] [network] defense response
|
(1420 genes)
|
IBA
|
|
|
| GO CC |
|
GO:0005886 [list] [network] plasma membrane
|
(3771 genes)
|
IBA
IDA
|
|
|
GO:0005739 [list] [network] mitochondrion
|
(4405 genes)
|
ISM
|
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
|
| GO MF |
|
GO:0033612 [list] [network] receptor serine/threonine kinase binding
|
(38 genes)
|
IPI
|
|
|
GO:0005102 [list] [network] signaling receptor binding
|
(74 genes)
|
IPI
|
|
|
GO:0004675 [list] [network] transmembrane receptor protein serine/threonine kinase activity
|
(158 genes)
|
IBA
|
|
|
GO:0004672 [list] [network] protein kinase activity
|
(1017 genes)
|
IDA
|
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_001078577.1
NP_196833.2
NP_850812.2
|
| BLAST |
NP_001078577.1
NP_196833.2
NP_850812.2
|
| Orthologous |
[Ortholog page]
LOC4326956 (osa)
LOC7491429 (ppo)
LOC11437782 (mtr)
LOC100285492 (zma)
LOC101055499 (sly)
LOC102664172 (gma)
LOC102664273 (gma)
LOC103846585 (bra)
LOC103850856 (bra)
LOC103856008 (bra)
LOC104880871 (vvi)
|
Subcellular
localization
wolf |
|
chlo 5,
mito 4,
nucl 1,
extr 1
|
(predict for NP_001078577.1)
|
|
chlo 4,
mito 4,
vacu 1
|
(predict for NP_196833.2)
|
|
chlo 4,
mito 4,
chlo_mito 4
|
(predict for NP_850812.2)
|
|
Subcellular
localization
TargetP |
|
mito 4
|
(predict for NP_001078577.1)
|
|
mito 4
|
(predict for NP_196833.2)
|
|
mito 4
|
(predict for NP_850812.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with CRN on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 5.5 |
AT1G29950 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
[detail] |
6240759 |
| 5.1 |
SARK |
Leucine-rich repeat protein kinase family protein |
[detail] |
829175 |
| 4.9 |
AT5G56590 |
O-Glycosyl hydrolases family 17 protein |
[detail] |
835760 |
|
Coexpressed
gene list |
[Coexpressed gene list for CRN]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
250284_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
250284_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
250284_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G13290 Gene
