[←][→] ath   AT5G13710 Gene
functional annotation
Function   sterol methyltransferase 1  
GO BP
GO:0016126 [list] [network] sterol biosynthetic process  (37 genes)  IBA IEA IMP TAS  
GO:0032259 [list] [network] methylation  (371 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0003838 [list] [network] sterol 24-C-methyltransferase activity  (2 genes)  IBA IDA IGI  
KEGG ath00100 [list] [network] Steroid biosynthesis (35 genes)
Protein NP_001078579.1  NP_196875.1 
BLAST NP_001078579.1  NP_196875.1 
Orthologous [Ortholog page] LOC541682 (zma)  LOC548073 (gma)  LOC4342690 (osa)  LOC9269350 (osa)  LOC11415411 (mtr)  LOC100252116 (vvi)  LOC100263590 (vvi)  LOC100796978 (gma)  LOC100818061 (gma)  LOC101252433 (sly)  LOC101256047 (sly)  LOC103850891 (bra)  LOC103856028 (bra) 
Subcellular
localization
wolf
cyto 4,  mito 4,  nucl 1  (predict for NP_001078579.1)
cyto 4,  mito 4,  nucl 1  (predict for NP_196875.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078579.1)
other 9  (predict for NP_196875.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 6
ath00100 Steroid biosynthesis 3
ath00010 Glycolysis / Gluconeogenesis 2
ath00020 Citrate cycle (TCA cycle) 2
ath00620 Pyruvate metabolism 2
Genes directly connected with SMT1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 TUB4 tubulin beta chain 4 [detail] 834459
5.9 AT2G48030 DNAse I-like superfamily protein [detail] 819415
5.7 DWF1 cell elongation protein / DWARF1 / DIMINUTO (DIM) [detail] 821519
5.7 AT5G25265 Hyp O-arabinosyltransferase-like protein [detail] 832598
5.4 AT4G19410 Pectinacetylesterase family protein [detail] 827682
Coexpressed
gene list		 [Coexpressed gene list for SMT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250254_at
250254_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250254_at
250254_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250254_at
250254_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831216      
Refseq ID (protein) NP_001078579.1 
NP_196875.1 


The preparation time of this page was 0.3 [sec].