[←][→] ath   At5g13880 Gene
functional annotation
Function   cotton fiber protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019748 [list] [network] secondary metabolic process  (766 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001332732.1  NP_568291.1 
BLAST NP_001332732.1  NP_568291.1 
Orthologous [Ortholog page] AT5G47920 (ath)  LOC4329435 (osa)  LOC4335641 (osa)  LOC7457997 (ppo)  LOC7497573 (ppo)  LOC11431449 (mtr)  LOC11435740 (mtr)  LOC11442444 (mtr)  LOC100780939 (gma)  LOC100781263 (gma)  LOC100807332 (gma)  LOC101252722 (sly)  LOC103837235 (bra)  LOC103846532 (bra)  LOC103854510 (bra)  LOC103874918 (bra)  LOC123045292 (tae)  LOC123053131 (tae)  LOC123154753 (tae)  LOC123159108 (tae)  LOC123166346 (tae)  LOC123185423 (tae)  LOC123411385 (hvu)  LOC123430198 (hvu) 
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for NP_001332732.1)
chlo 3,  nucl 3,  cyto 1,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_568291.1)
Subcellular
localization
TargetP
scret 5,  other 5  (predict for NP_001332732.1)
other 5  (predict for NP_568291.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G13880 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 AT4G39190 nucleolar-like protein [detail] 830074
5.9 AT1G80520 Sterile alpha motif (SAM) domain-containing protein [detail] 844391
5.7 PP2-B1 phloem protein 2-B1 [detail] 814754
5.5 AT5G56050 late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family protein [detail] 835703
5.0 AT5G02460 Dof-type zinc finger DNA-binding family protein [detail] 830976
Coexpressed
gene list		 [Coexpressed gene list for AT5G13880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250211_at
250211_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250211_at
250211_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250211_at
250211_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831235      
Refseq ID (protein) NP_001332732.1 
NP_568291.1 


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