[←][→] ath   AT5G13930 Gene
functional annotation
Function   Chalcone and stilbene synthase family protein  
GO BP
GO:0009715 [list] [network] chalcone biosynthetic process  (1 genes)  IMP  
GO:0031540 [list] [network] regulation of anthocyanin biosynthetic process  (17 genes)  IEP  
GO:0009813 [list] [network] flavonoid biosynthetic process  (58 genes)  IEA IMP ISS  
GO:0009926 [list] [network] auxin polar transport  (66 genes)  IMP  
GO:0010224 [list] [network] response to UV-B  (71 genes)  IMP  
GO:0009629 [list] [network] response to gravity  (98 genes)  IMP  
GO:0009611 [list] [network] response to wounding  (212 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (222 genes)  IEP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (442 genes)  IEP  
GO CC
GO:0009705 [list] [network] plant-type vacuole membrane  (124 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0016210 [list] [network] naringenin-chalcone synthase activity  (1 genes)  IEA IMP  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00941 [list] [network] Flavonoid biosynthesis (22 genes)
ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_196897.1 
BLAST NP_196897.1 
Orthologous [Ortholog page] CHS1 (gma)  CHS1 (sly)  CHS2 (sly)  LOC4342725 (osa)  LOC4350636 (osa)  LOC7466313 (ppo)  LOC11407003 (mtr)  LOC11418796 (mtr)  LOC11420334 (mtr)  LOC11420610 (mtr)  LOC11420611 (mtr)  LOC11421144 (mtr)  LOC11424172 (mtr)  LOC11436702 (mtr)  LOC11438511 (mtr)  LOC11439469 (mtr)  LOC11440049 (mtr)  LOC11442534 (mtr)  LOC25485043 (mtr)  LOC25494497 (mtr)  LOC25494498 (mtr)  CHS8 (gma)  CHS (vvi)  CHS3 (vvi)  CHS (vvi)  LOC100266562 (vvi)  LOC100274415 (zma)  LOC100282642 (zma)  CHS13 (gma)  CHS4A (gma)  CHS7 (gma)  CHS11 (gma)  CHS3C (gma)  CHS9 (gma)  CHS3 (gma)  CHS4B (gma)  CHS6 (gma)  LOC103836794 (bra)  LOC103846527 (bra)  LOC103850907 (bra)  LOC103854548 (bra)  LOC103856040 (bra)  CHS3B (gma)  CHS5 (gma)  CHS2 (gma) 
Subcellular
localization
wolf
cyto 6,  pero 2,  plas 1  (predict for NP_196897.1)
Subcellular
localization
TargetP
other 7  (predict for NP_196897.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 6
ath00944 Flavone and flavonol biosynthesis 2
Genes directly connected with TT4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.0 FLS1 flavonol synthase 1 [detail] 830765
19.9 F3H flavanone 3-hydroxylase [detail] 824287
19.5 CHIL Chalcone-flavanone isomerase family protein [detail] 830409
12.8 TT7 Cytochrome P450 superfamily protein [detail] 830693
11.6 AT5G22020 Calcium-dependent phosphotriesterase superfamily protein [detail] 832262
9.1 KAT5 peroxisomal 3-keto-acyl-CoA thiolase 2 [detail] 834946
8.9 ELIP1 Chlorophyll A-B binding family protein [detail] 821855
5.8 scpl10 serine carboxypeptidase-like 10 [detail] 816831
Coexpressed
gene list		 [Coexpressed gene list for TT4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250207_at
250207_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250207_at
250207_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250207_at
250207_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831241      
Refseq ID (protein) NP_196897.1 


The preparation time of this page was 0.2 [sec].