[←][→] ath   AT5G13960 Gene
functional annotation
Function   histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein  
GO BP
GO:0051567 [list] [network] histone H3-K9 methylation  (7 genes)  IMP  
GO:0010216 [list] [network] maintenance of DNA methylation  (20 genes)  IDA  
GO:0018022 [list] [network] peptidyl-lysine methylation  (43 genes)  IDA  
GO:0016571 [list] [network] histone methylation  (52 genes)  IDA  
GO CC
GO:0000775 [list] [network] chromosome, centromeric region  (55 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0046974 [list] [network] histone methyltransferase activity (H3-K9 specific)  (1 genes)  IDA  
GO:0010428 [list] [network] methyl-CpNpG binding  (4 genes)  IDA  
GO:0010429 [list] [network] methyl-CpNpN binding  (4 genes)  IDA  
GO:0010385 [list] [network] double-stranded methylated DNA binding  (8 genes)  IDA  
GO:0008327 [list] [network] methyl-CpG binding  (16 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00310 [list] [network] Lysine degradation (38 genes)
Protein NP_001332445.1  NP_196900.1 
BLAST NP_001332445.1  NP_196900.1 
Orthologous [Ortholog page] LOC542089 (zma)  LOC4326952 (osa)  LOC7458012 (ppo)  LOC11438560 (mtr)  LOC25496593 (mtr)  LOC100265173 (vvi)  LOC100383674 (zma)  LOC100795584 (gma)  LOC100796701 (gma)  LOC100812749 (gma)  LOC101260505 (sly)  LOC103856044 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001332445.1)
nucl 7,  cyto 3  (predict for NP_196900.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001332445.1)
other 5,  mito 3  (predict for NP_196900.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03440 Homologous recombination 5
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath00270 Cysteine and methionine metabolism 2
Genes directly connected with SUVH4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 AT3G54750 downstream neighbor of Son [detail] 824640
7.4 CHR1 chromatin remodeling 1 [detail] 836808
7.2 CMT3 chromomethylase 3 [detail] 843313
Coexpressed
gene list		 [Coexpressed gene list for SUVH4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250212_at
250212_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250212_at
250212_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250212_at
250212_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831244      
Refseq ID (protein) NP_001332445.1 
NP_196900.1 


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