ATTED-II : GeneID search result

[←][→] ath At5g14640 Gene

functional annotation

Function

shaggy-like kinase 13

GO BP

GO:0006972 [list] [network] hyperosmotic response	(69 genes)	IEP
GO:0046777 [list] [network] protein autophosphorylation	(121 genes)	HDA
GO:0009651 [list] [network] response to salt stress	(607 genes)	IEP

GO CC

GO:0009507 [list] [network] chloroplast

(5004 genes)

ISM

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(454 genes)	HDA
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_001329975.1 NP_196968.2

BLAST

NP_001329975.1 NP_196968.2

Orthologous

[Ortholog page] LOC542954 (tae) SKdZeta (ath) ATSK12 (ath) BIN2 (ath) SK32 (ath) SK 11 (ath) GSK1 (ath) SK41 (ath) SK42 (ath) LOC4326720 (osa) LOC4327089 (osa) LOC4327108 (osa) LOC4328830 (osa) LOC4334738 (osa) LOC4337722 (osa) LOC4338079 (osa) GSK4 (osa) LOC4349147 (osa) LOC7460487 (ppo) LOC7464890 (ppo) LOC7465223 (ppo) LOC7472291 (ppo) LOC7476330 (ppo) LOC11406396 (mtr) LOC11406490 (mtr) LOC11417436 (mtr) LOC11423486 (mtr) LOC11430329 (mtr) LOC11431576 (mtr) LOC18098332 (ppo) LOC18098492 (ppo) LOC18111150 (ppo) LOC25485989 (mtr) LOC25502314 (mtr) LOC100037596 (tae) LOC100306031 (gma) LOC100779448 (gma) LOC100779909 (gma) GSK-3 (gma) LOC100784150 (gma) LOC100786458 (gma) LOC100788046 (gma) LOC100788319 (gma) LOC100788612 (gma) LOC100795659 (gma) LOC100798867 (gma) LOC100799387 (gma) LOC100799582 (gma) LOC100802451 (gma) LOC100806839 (gma) BIN2 (gma) LOC100810237 (gma) LOC100810924 (gma) LOC100811346 (gma) LOC100812801 (gma) LOC100817819 (gma) LOC100820098 (gma) LOC101244391 (sly) LOC101249039 (sly) LOC101249608 (sly) LOC101254442 (sly) LOC101258488 (sly) LOC101259887 (sly) LOC101263118 (sly) LOC101265073 (sly) LOC101266803 (sly) LOC101669861 (tae) LOC101669862 (tae) LOC101867529 (tae) LOC101867530 (tae) LOC103834080 (bra) LOC103836306 (bra) LOC103836905 (bra) LOC103837141 (bra) LOC103850011 (bra) LOC103856089 (bra) LOC103856168 (bra) LOC103856756 (bra) LOC103858856 (bra) LOC103859116 (bra) LOC103861010 (bra) LOC103865093 (bra) LOC103868242 (bra) LOC103870788 (bra) LOC103871763 (bra) LOC103874482 (bra) LOC112324110 (ppo) LOC123060616 (tae) LOC123060876 (tae) LOC123069541 (tae) LOC123087792 (tae) LOC123110560 (tae) LOC123114135 (tae) LOC123114259 (tae) LOC123115398 (tae) LOC123123624 (tae) LOC123123743 (tae) LOC123124011 (tae) LOC123190235 (tae) LOC123394911 (hvu) LOC123395022 (hvu) LOC123419464 (hvu) LOC123427504 (hvu) LOC123434949 (hvu) LOC123443084 (hvu) LOC123443370 (hvu)

Subcellular
localization
wolf

cyto 5, nucl 1, mito 1, vacu 1, pero 1, golg 1, cysk_plas 1	(predict for NP_001329975.1)
cyto 5, nucl 1, mito 1, vacu 1, pero 1, golg 1, cysk_plas 1	(predict for NP_196968.2)

Subcellular
localization
TargetP

other 6, chlo 3	(predict for NP_001329975.1)
other 6, chlo 3	(predict for NP_196968.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2
ath00190	Oxidative phosphorylation	2

Genes directly connected with SK13 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.3	PPa2	pyrophosphorylase 2	[detail]	816338
5.0	WSIP2	WUS-interacting protein 2	[detail]	820831
4.7	AT4G00200	AT hook motif DNA-binding family protein	[detail]	828162
4.2	AT5G40640	uncharacterized protein	[detail]	834063

Coexpressed
gene list

[Coexpressed gene list for SK13]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250141_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250141_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250141_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831316
Refseq ID (protein)	NP_001329975.1
Refseq ID (protein)	NP_196968.2

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