[][] ath   AT5G14660 Gene
functional annotation
Function   peptide deformylase 1B
GO BP
GO:0043686 [list] [network] co-translational protein modification  (2 genes)  IBA  
GO:0031365 [list] [network] N-terminal protein amino acid modification  (15 genes)  IBA  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (2 genes)  IBA IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001332718.1  NP_196970.1  NP_850821.1 
BLAST NP_001332718.1  NP_196970.1  NP_850821.1 
Orthologous [Ortholog page] PDF1B (sly)LOC4326576 (osa)LOC7496836 (ppo)LOC9269695 (osa)LOC25498044 (mtr)LOC100250707 (vvi)LOC100500424 (gma)LOC100527799 (gma)LOC103636114 (zma)LOC103846472 (bra)
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_001332718.1)
chlo 9,  chlo_mito 5  (predict for NP_196970.1)
chlo 9,  chlo_mito 5  (predict for NP_850821.1)
Subcellular
localization
TargetP
chlo 7,  mito 5  (predict for NP_001332718.1)
chlo 7,  mito 5  (predict for NP_196970.1)
chlo 7,  mito 5  (predict for NP_850821.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PDF1B on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.7 AT5G11480 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 831019
8.2 AT1G56050 GTP-binding protein-like protein [detail] 842056
8.1 PPD5 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) [detail] 831016
6.2 AT4G34730 ribosome-binding factor A family protein [detail] 829625
Coexpressed
gene list
[Coexpressed gene list for PDF1B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250146_at
250146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250146_at
250146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250146_at
250146_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 831318    
Refseq ID (protein) NP_001332718.1 
NP_196970.1 
NP_850821.1 


The preparation time of this page was 0.2 [sec].