[←][→] ath   At5g14660 Gene
functional annotation
Function   peptide deformylase 1B    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0033365 [list] [network] protein localization to organelle  (212 genes)  IEA  
GO:0048316 [list] [network] seed development  (1294 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0042586 [list] [network] peptide deformylase activity  (2 genes)  IDA  
KEGG
Protein NP_001332718.1  NP_196970.1  NP_850821.1 
BLAST NP_001332718.1  NP_196970.1  NP_850821.1 
Orthologous [Ortholog page] PDF1B (sly)  LOC4326576 (osa)  LOC7496836 (ppo)  LOC9269695 (osa)  LOC25498044 (mtr)  LOC100500424 (gma)  LOC100527799 (gma)  LOC103846472 (bra)  LOC123061560 (tae)  LOC123070194 (tae)  LOC123078636 (tae)  LOC123443943 (hvu) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_001332718.1)
chlo 9,  chlo_mito 5  (predict for NP_196970.1)
chlo 9,  chlo_mito 5  (predict for NP_850821.1)
Subcellular
localization
TargetP
chlo 7,  mito 5  (predict for NP_001332718.1)
chlo 7,  mito 5  (predict for NP_196970.1)
chlo 7,  mito 5  (predict for NP_850821.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
Genes directly connected with PDF1B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.2 PPD5 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) [detail] 831016
9.1 AT1G56050 GTP-binding protein-like protein [detail] 842056
9.0 AT5G11480 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 831019
6.2 AT4G34730 ribosome-binding factor A family protein [detail] 829625
Coexpressed
gene list		 [Coexpressed gene list for PDF1B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250146_at
250146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250146_at
250146_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250146_at
250146_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831318      
Refseq ID (protein) NP_001332718.1 
NP_196970.1 
NP_850821.1 


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