[←][→] ath   At5g15550 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006364 [list] [network] rRNA processing  (169 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001332618.1  NP_197059.1  NP_974784.1 
BLAST NP_001332618.1  NP_197059.1  NP_974784.1 
Orthologous [Ortholog page] LOC4343819 (osa)  LOC7467892 (ppo)  LOC11445282 (mtr)  LOC100789690 (gma)  LOC100811859 (gma)  LOC100818682 (gma)  LOC100819142 (gma)  LOC101261678 (sly)  LOC103846403 (bra)  LOC103850990 (bra)  LOC103856143 (bra)  LOC123044296 (tae)  LOC123052172 (tae)  LOC123188035 (tae)  LOC123425422 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_plas 2,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_001332618.1)
cyto 4,  nucl 2,  cyto_plas 2,  mito 1,  cysk 1,  nucl_plas 1  (predict for NP_197059.1)
nucl 3,  cyto 3,  cyto_nucl 3,  mito 2  (predict for NP_974784.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001332618.1)
other 7  (predict for NP_197059.1)
other 7  (predict for NP_974784.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 2
Genes directly connected with AT5G15550 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.2 PWP2 periodic tryptophan protein 2 [detail] 838115
13.0 AT4G28450 WD repeat and SOF domain-containing protein 1 [detail] 828962
12.6 AT2G18900 Transducin/WD40 repeat-like superfamily protein [detail] 816406
12.3 AT5G14520 pescadillo-like protein [detail] 831303
11.9 TRM11 tRNA modification 11 protein [detail] 822245
10.2 AT2G19540 Transducin family protein / WD-40 repeat family protein [detail] 816473
8.4 ELP2 elongator protein 2 [detail] 841378
6.8 AT1G08845 Ribosomal L18p/L5e family protein [detail] 837407
Coexpressed
gene list		 [Coexpressed gene list for AT5G15550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246559_at
246559_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246559_at
246559_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246559_at
246559_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831408      
Refseq ID (protein) NP_001332618.1 
NP_197059.1 
NP_974784.1 


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