[←][→] ath   AT5G15840 Gene
functional annotation
Function   B-box type zinc finger protein with CCT domain-containing protein  
GO BP
GO:0010018 [list] [network] far-red light signaling pathway  (4 genes)  IMP  
GO:0010218 [list] [network] response to far red light  (54 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (111 genes)  IGI  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IBA IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IMP  
GO:0030154 [list] [network] cell differentiation  (695 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM NAS  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IDA ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04712 [list] [network] Circadian rhythm - plant (36 genes)
Protein NP_001031887.1  NP_197088.1 
BLAST NP_001031887.1  NP_197088.1 
Orthologous [Ortholog page] CO1 (sly)  COL2 (ath)  COL1 (ath)  LOC4340746 (osa)  LOC4346474 (osa)  LOC7468389 (ppo)  LOC25497637 (mtr)  LOC100147736 (zma)  LOC100248114 (vvi)  COL2a (gma)  COL2B (gma)  LOC100782635 (gma)  COL13 (gma)  CO3 (sly)  LOC101246004 (sly)  LOC103249154 (bra)  LOC103846378 (bra)  LOC103846381 (bra)  LOC103851008 (bra)  LOC103858956 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001031887.1)
nucl 9  (predict for NP_197088.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031887.1)
other 8  (predict for NP_197088.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CO on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.5 TMAC2 AFP2 (ABI five-binding protein 2) family protein [detail] 821182
4.4 RVE2 Homeodomain-like superfamily protein [detail] 833700
3.7 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein [detail] 832510
Coexpressed
gene list		 [Coexpressed gene list for CO]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246525_at
246525_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246525_at
246525_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246525_at
246525_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831441      
Refseq ID (protein) NP_001031887.1 
NP_197088.1 


The preparation time of this page was 0.2 [sec].