[←][→] ath   At5g16470 Gene
functional annotation
Function   zinc finger (C2H2 type) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0071452 [list] [network] cellular response to singlet oxygen  (8 genes)  IMP  
GO:0080183 [list] [network] response to photooxidative stress  (13 genes)  ISS  
GO:1900055 [list] [network] regulation of leaf senescence  (53 genes)  IMP  
GO:0010150 [list] [network] leaf senescence  (195 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (28 genes)  ISS  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_001332259.1  NP_197151.1 
BLAST NP_001332259.1  NP_197151.1 
Orthologous [Ortholog page] AT3G02790 (ath)  LOC4342023 (osa)  LOC7455210 (ppo)  LOC7477691 (ppo)  LOC11408160 (mtr)  LOC100682502 (tae)  LOC100784149 (gma)  LOC100788257 (gma)  LOC101256581 (sly)  LOC103846331 (bra)  LOC103851046 (bra)  LOC103856199 (bra)  LOC103870893 (bra)  LOC123162566 (tae)  LOC123164450 (tae)  LOC123407253 (hvu) 
Subcellular
localization
wolf
mito 6,  nucl 3  (predict for NP_001332259.1)
mito 6,  nucl 3  (predict for NP_197151.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001332259.1)
other 8  (predict for NP_197151.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath04120 Ubiquitin mediated proteolysis 2
ath03420 Nucleotide excision repair 2
Genes directly connected with AT5G16470 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.4 AT2G23090 Uncharacterized protein family SERF [detail] 816839
8.2 SKP1 S phase kinase-associated protein 1 [detail] 843928
8.1 AT5G05710 Pleckstrin homology (PH) domain superfamily protein [detail] 830455
6.7 AT5G65495 uncharacterized protein [detail] 836675
6.5 AT4G24440 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) [detail] 828546
5.8 AT4G30760 Putative endonuclease or glycosyl hydrolase [detail] 829199
5.5 AT2G15910 CSL zinc finger domain-containing protein [detail] 816087
5.5 AT1G75335 nucleolar-like protein [detail] 6240462
5.1 AAK6 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836156
Coexpressed
gene list		 [Coexpressed gene list for AT5G16470]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250119_at
250119_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250119_at
250119_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250119_at
250119_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831508      
Refseq ID (protein) NP_001332259.1 
NP_197151.1 


The preparation time of this page was 0.3 [sec].