[←][→] ath   At5g17230 Gene
functional annotation
Function   PHYTOENE SYNTHASE    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016117 [list] [network] carotenoid biosynthetic process  (21 genes)  IDA IMP  
GO CC
GO:0010287 [list] [network] plastoglobule  (57 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0016767 [list] [network] geranylgeranyl-diphosphate geranylgeranyltransferase activity  (1 genes)  IDA ISS TAS  
GO:0046905 [list] [network] 15-cis-phytoene synthase activity  (1 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00906 [list] [network] Carotenoid biosynthesis (29 genes)
Protein NP_001031895.1  NP_001318580.1  NP_001331504.1  NP_197225.1 
BLAST NP_001031895.1  NP_001318580.1  NP_001331504.1  NP_197225.1 
Orthologous [Ortholog page] PSY2 (sly)  Psy1 (sly)  LOC4342137 (osa)  LOC4347813 (osa)  LOC4352846 (osa)  LOC7464659 (ppo)  LOC7480715 (ppo)  LOC11421788 (mtr)  LOC11426744 (mtr)  LOC18106554 (ppo)  LOC25490580 (mtr)  LOC100776503 (gma)  LOC100780932 (gma)  LOC100786911 (gma)  LOC100807453 (gma)  LOC100811518 (gma)  LOC100817119 (gma)  LOC103846262 (bra)  LOC103851090 (bra)  LOC103856237 (bra)  LOC123102037 (tae)  LOC123104764 (tae)  LOC123110153 (tae)  LOC123113055 (tae)  LOC123119179 (tae)  LOC123122573 (tae)  LOC123156221 (tae)  LOC123397703 (hvu)  LOC123408513 (hvu)  LOC123451928 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_001031895.1)
chlo 10  (predict for NP_001318580.1)
chlo 10  (predict for NP_001331504.1)
chlo 10  (predict for NP_197225.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001031895.1)
chlo 9  (predict for NP_001318580.1)
chlo 9  (predict for NP_001331504.1)
chlo 9  (predict for NP_197225.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00195 Photosynthesis 2
ath00906 Carotenoid biosynthesis 2
Genes directly connected with PSY on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.8 SIGA sigma factor A [detail] 842794
7.3 ATH13 ABC2 homolog 13 [detail] 836618
7.1 AT5G08050 wiskott-aldrich syndrome family protein, putative (DUF1118) [detail] 830699
7.0 LUT2 Lycopene beta/epsilon cyclase protein [detail] 835806
Coexpressed
gene list		 [Coexpressed gene list for PSY]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250095_at
250095_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250095_at
250095_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250095_at
250095_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831587      
Refseq ID (protein) NP_001031895.1 
NP_001318580.1 
NP_001331504.1 
NP_197225.1 


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