[←][→] ath   At5g17440 Gene
functional annotation
Function   LUC7 related protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:2000026 [list] [network] regulation of multicellular organismal development  (499 genes)  IEA  
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001331177.1  NP_568347.1 
BLAST NP_001331177.1  NP_568347.1 
Orthologous [Ortholog page] LOC780655 (tae)  UNE6 (ath)  LOC4329919 (osa)  LOC4334750 (osa)  LOC7459230 (ppo)  LOC11426052 (mtr)  LOC18104226 (ppo)  LOC100777711 (gma)  LOC100793888 (gma)  LOC101247022 (sly)  LOC103833174 (bra)  LOC103851108 (bra)  LOC123087670 (tae)  LOC123114268 (tae)  LOC123127660 (tae)  LOC123137416 (tae)  LOC123144763 (tae)  LOC123395044 (hvu)  LOC123401349 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl_plas 1,  mito 1,  plas 1,  pero 1  (predict for NP_001331177.1)
cyto 6,  nucl 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_568347.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331177.1)
other 8  (predict for NP_568347.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
Genes directly connected with AT5G17440 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.0 UNE6 LUC7 related protein [detail] 821276
10.0 AT5G09880 Splicing factor, CC1-like protein [detail] 830848
9.8 U1-70K U1 small nuclear ribonucleoprotein-70K [detail] 824230
7.7 AT4G35785 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 829732
6.7 AT3G48120 serine/arginine-rich splicing factor [detail] 823967
6.4 AT4G30820 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [detail] 829205
6.0 AT1G36070 Transducin/WD40 repeat-like superfamily protein [detail] 840511
5.3 PTB1 polypyrimidine tract-binding protein 1 [detail] 821129
Coexpressed
gene list		 [Coexpressed gene list for AT5G17440]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246436_at
246436_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246436_at
246436_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246436_at
246436_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831610      
Refseq ID (protein) NP_001331177.1 
NP_568347.1 


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