[←][→] ath   AT5G17440 Gene
functional annotation
Function   LUC7 related protein  
GO BP
GO:0006376 [list] [network] mRNA splice site selection  (5 genes)  IBA  
GO CC
GO:0005685 [list] [network] U1 snRNP  (17 genes)  IBA  
GO:0071004 [list] [network] U2-type prespliceosome  (24 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
KEGG
Protein NP_001331177.1  NP_568347.1 
BLAST NP_001331177.1  NP_568347.1 
Orthologous [Ortholog page] UNE6 (ath)  LOC4334750 (osa)  LOC11426052 (mtr)  LOC100191822 (zma)  LOC100254714 (vvi)  LOC100282822 (zma)  LOC100777711 (gma)  LOC100793888 (gma)  LOC101247022 (sly)  LOC103833174 (bra)  LOC103851108 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl_plas 1,  mito 1,  plas 1,  pero 1  (predict for NP_001331177.1)
cyto 6,  nucl 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_568347.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331177.1)
other 8  (predict for NP_568347.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 10
Genes directly connected with AT5G17440 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 UNE6 LUC7 related protein [detail] 821276
9.2 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor [detail] 829822
8.0 AT5G09880 Splicing factor, CC1-like protein [detail] 830848
6.1 AT3G48120 serine/arginine-rich splicing factor [detail] 823967
Coexpressed
gene list		 [Coexpressed gene list for AT5G17440]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246436_at
246436_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246436_at
246436_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246436_at
246436_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831610      
Refseq ID (protein) NP_001331177.1 
NP_568347.1 


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