ATTED-II : GeneID search result

[←][→] ath AT5G17600 Gene

functional annotation

Function

RING/U-box superfamily protein

GO BP

GO:0016567 [list] [network] protein ubiquitination

(624 genes)

IBA IEA

GO CC

GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA
GO:0016740 [list] [network] transferase activity	(3833 genes)	IEA

KEGG

Protein

NP_197262.1

BLAST

NP_197262.1

Orthologous

[Ortholog page] LOC4330383 (osa) LOC4336823 (osa) ATL4H (ath) LOC7491089 (ppo) LOC7491862 (ppo) LOC11419509 (mtr) LOC11429516 (mtr) LOC100217100 (zma) LOC100243705 (vvi) LOC100260525 (vvi) LOC100792267 (gma) LOC100792799 (gma) LOC100809014 (gma) LOC100812969 (gma) LOC100817628 (gma) LOC101255238 (sly) LOC101260465 (sly) LOC101265935 (sly) LOC102660020 (gma) LOC103627577 (zma) LOC103855861 (bra) LOC103856257 (bra)

Subcellular
localization
wolf

nucl 2, chlo 1, cyto 1, plas 1, E.R. 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1

(predict for NP_197262.1)

Subcellular
localization
TargetP

other 8

(predict for NP_197262.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G17600 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.2	AT3G60080	RING/U-box superfamily protein	[detail]	825178
5.3	AT2G15020	hypothetical protein	[detail]	815991
4.9	ICK1	Cyclin-dependent kinase inhibitor family protein	[detail]	816875
4.5	AT3G25590	micronuclear linker histone polyprotein-like protein	[detail]	822146

Coexpressed
gene list

[Coexpressed gene list for AT5G17600]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

246439_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

246439_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

246439_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831626
Refseq ID (protein)	NP_197262.1

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