[←][→] ath   At5g17790 Gene
functional annotation
Function   zinc finger (Ran-binding) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1900871 [list] [network] chloroplast mRNA modification  (4 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_197281.1 
BLAST NP_197281.1 
Orthologous [Ortholog page] LOC4327482 (osa)  LOC7482390 (ppo)  LOC25498993 (mtr)  LOC100775801 (gma)  LOC100792849 (gma)  LOC101264457 (sly)  LOC103845899 (bra)  LOC103856263 (bra)  LOC123062407 (tae)  LOC123071185 (tae)  LOC123079544 (tae)  LOC123444693 (hvu) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_197281.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for NP_197281.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03040 Spliceosome 2
ath04144 Endocytosis 2
Genes directly connected with VAR3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 CAF1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein [detail] 816521
6.5 AT1G23180 ARM repeat superfamily protein [detail] 838926
6.4 EMB976 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 832785
Coexpressed
gene list		 [Coexpressed gene list for VAR3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250050_at
250050_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250050_at
250050_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250050_at
250050_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831647      
Refseq ID (protein) NP_197281.1 


The preparation time of this page was 0.2 [sec].