[←][→] ath   At5g17870 Gene
functional annotation
Function   plastid-specific 50S ribosomal protein 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0065003 [list] [network] protein-containing complex assembly  (393 genes)  IEA  
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA IEA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0019843 [list] [network] rRNA binding  (21 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (63 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_001331057.1  NP_568358.1 
BLAST NP_001331057.1  NP_568358.1 
Orthologous [Ortholog page] LOC4350706 (osa)  LOC7467236 (ppo)  LOC11436654 (mtr)  LOC100805806 (gma)  LOC101246627 (sly)  LOC103845893 (bra)  LOC103851136 (bra)  LOC103856269 (bra)  LOC123152248 (tae)  LOC123156910 (tae)  LOC123165148 (tae)  LOC123407793 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001331057.1)
chlo 9  (predict for NP_568358.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331057.1)
scret 3  (predict for NP_568358.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
Genes directly connected with PSRP6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.5 PSRP5 plastid-specific 50S ribosomal protein 5 [detail] 824858
9.4 PSRP4 plastid-specific ribosomal protein 4 [detail] 818392
8.7 AT1G29070 Ribosomal protein L34 [detail] 839781
6.7 NACA2 nascent polypeptide-associated complex subunit alpha-like protein 2 [detail] 824109
Coexpressed
gene list		 [Coexpressed gene list for PSRP6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250058_at
250058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250058_at
250058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250058_at
250058_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831655      
Refseq ID (protein) NP_001331057.1 
NP_568358.1 


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