[][] ath   AT5G17990 Gene
functional annotation
Function   tryptophan biosynthesis 1
GO BP
GO:0000162 [list] [network] tryptophan biosynthetic process  (22 genes)  IBA IEA IMP  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM ISS  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO MF
GO:0004048 [list] [network] anthranilate phosphoribosyltransferase activity  (1 genes)  TAS  
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_197300.1 
BLAST NP_197300.1 
Orthologous [Ortholog page] LOC4331468 (osa)LOC7456898 (ppo)LOC11430186 (mtr)LOC100192060 (zma)LOC100252445 (vvi)LOC100255305 (vvi)LOC100794615 (gma)LOC101249247 (sly)LOC101257271 (sly)LOC103845884 (bra)LOC103851145 (bra)
Subcellular
localization
wolf
chlo 8,  cyto 1  (predict for NP_197300.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_197300.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath01210 2-Oxocarboxylic acid metabolism 5
ath00260 Glycine, serine and threonine metabolism 4
ath00380 Tryptophan metabolism 4
Genes directly connected with TRP1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
13.0 AT2G04400 Aldolase-type TIM barrel family protein [detail] 814980
12.6 TSA1 tryptophan synthase alpha chain [detail] 824629
10.9 YLS5 Class I glutamine amidotransferase-like superfamily protein [detail] 818470
9.0 TSB1 tryptophan synthase beta-subunit 1 [detail] 835571
8.0 PRS3 phosphoribosyl pyrophosphate (PRPP) synthase 3 [detail] 837613
Coexpressed
gene list
[Coexpressed gene list for TRP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250014_at
250014_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250014_at
250014_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
250014_at
250014_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 831666    
Refseq ID (protein) NP_197300.1 


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