[←][→] ath   At5g17990 Gene
functional annotation
Function   tryptophan biosynthesis 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000162 [list] [network] tryptophan biosynthetic process  (17 genes)  IMP  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM ISS  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0004048 [list] [network] anthranilate phosphoribosyltransferase activity  (1 genes)  TAS  
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_197300.1 
BLAST NP_197300.1 
Orthologous [Ortholog page] LOC4331468 (osa)  LOC7456898 (ppo)  LOC11430186 (mtr)  LOC100794615 (gma)  LOC101249247 (sly)  LOC101257271 (sly)  LOC103845884 (bra)  LOC103851145 (bra)  LOC123093544 (tae)  LOC123098815 (tae)  LOC123105773 (tae)  LOC123449819 (hvu) 
Subcellular
localization
wolf
chlo 8,  cyto 1  (predict for NP_197300.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_197300.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 9
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
ath01210 2-Oxocarboxylic acid metabolism 4
ath00260 Glycine, serine and threonine metabolism 3
ath00380 Tryptophan metabolism 3
Genes directly connected with TRP1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.2 AT2G04400 Aldolase-type TIM barrel family protein [detail] 814980
12.9 TSA1 tryptophan synthase alpha chain [detail] 824629
11.4 YLS5 Class I glutamine amidotransferase-like superfamily protein [detail] 818470
8.1 PRS3 phosphoribosyl pyrophosphate (PRPP) synthase 3 [detail] 837613
4.8 CRL2 NAD(P)-binding Rossmann-fold superfamily protein [detail] 817926
Coexpressed
gene list		 [Coexpressed gene list for TRP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250014_at
250014_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250014_at
250014_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250014_at
250014_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831666      
Refseq ID (protein) NP_197300.1 


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