[←][→] ath   AT5G19520 Gene
functional annotation
Function   mechanosensitive channel of small conductance-like 9  
GO BP
GO:0050982 [list] [network] detection of mechanical stimulus  (3 genes)  IBA IMP  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO:0006820 [list] [network] anion transport  (285 genes)  IBA  
GO:0055085 [list] [network] transmembrane transport  (778 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0008381 [list] [network] mechanosensitive ion channel activity  (10 genes)  IBA IMP  
KEGG
Protein NP_001331595.1  NP_197453.1 
BLAST NP_001331595.1  NP_197453.1 
Orthologous [Ortholog page] MSL10 (ath)  LOC4340431 (osa)  LOC7473191 (ppo)  LOC11423317 (mtr)  LOC11428784 (mtr)  LOC11442238 (mtr)  LOC25486477 (mtr)  LOC100245659 (vvi)  LOC100257841 (vvi)  LOC100262967 (vvi)  LOC100777332 (gma)  LOC100777617 (gma)  LOC100803107 (gma)  LOC100813203 (gma)  LOC101245681 (sly)  LOC103625685 (zma)  LOC103637910 (zma)  LOC103845745 (bra)  LOC103845746 (bra)  LOC103846669 (bra)  LOC103850813 (bra)  LOC103851279 (bra)  LOC103855954 (bra)  LOC103856384 (bra)  LOC103856385 (bra)  LOC103858383 (bra)  LOC106794330 (gma) 
Subcellular
localization
wolf
plas 4,  vacu 2,  golg 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for NP_001331595.1)
plas 4,  vacu 2,  golg 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for NP_197453.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001331595.1)
other 9  (predict for NP_197453.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with MSL9 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.3 AT2G34020 Calcium-binding EF-hand family protein [detail] 817963
9.6 AT5G48940 Leucine-rich repeat transmembrane protein kinase family protein [detail] 834952
8.7 AT2G25980 Mannose-binding lectin superfamily protein [detail] 817139
8.5 NPY4 Phototropic-responsive NPH3 family protein [detail] 816835
7.9 AT4G29690 Alkaline-phosphatase-like family protein [detail] 829090
7.8 EIR1 Auxin efflux carrier family protein [detail] 835813
7.5 AT5G35940 Mannose-binding lectin superfamily protein [detail] 833584
6.8 ATS Homeodomain-like superfamily protein [detail] 834270
5.9 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily protein [detail] 834863
5.8 ABCG35 pleiotropic drug resistance 7 [detail] 838087
5.6 AT4G23590 Tyrosine transaminase family protein [detail] 828459
Coexpressed
gene list		 [Coexpressed gene list for MSL9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245944_at
245944_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245944_at
245944_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245944_at
245944_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832072      
Refseq ID (protein) NP_001331595.1 
NP_197453.1 


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