[←][→] ath   AT5G19540 Gene
functional annotation
Function   thermosome subunit gamma  
GO BP
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_001318600.1  NP_197455.1 
BLAST NP_001318600.1  NP_197455.1 
Orthologous [Ortholog page] LOC4345464 (osa)  LOC7458765 (ppo)  LOC11427583 (mtr)  LOC100249177 (vvi)  LOC100275547 (zma)  LOC100790976 (gma)  LOC100795956 (gma)  LOC101249241 (sly)  LOC103851282 (bra) 
Subcellular
localization
wolf
chlo 4,  plas 4,  vacu 1,  pero 1  (predict for NP_001318600.1)
chlo 4,  plas 4,  vacu 1,  pero 1  (predict for NP_197455.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001318600.1)
chlo 9  (predict for NP_197455.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00906 Carotenoid biosynthesis 2
Genes directly connected with AT5G19540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 AT5G05200 Protein kinase superfamily protein [detail] 830402
8.1 AT1G28140 integral membrane family protein [detail] 839708
7.6 AT1G54520 myelin-associated oligodendrocyte basic protein [detail] 841894
7.4 AT3G10970 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 820268
7.3 APG2 Sec-independent periplasmic protein translocase [detail] 814640
6.8 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II [detail] 817019
6.6 AT3G19900 hypothetical protein [detail] 821528
6.2 DAC transmembrane protein [detail] 819775
6.2 ACD2 accelerated cell death 2 (ACD2) [detail] 829854
5.6 CYP76C1 cytochrome P450, family 76, subfamily C, polypeptide 1 [detail] 819164
5.6 FIM1 fimbrin 1 [detail] 828777
4.7 AT4G17370 Oxidoreductase family protein [detail] 827449
4.7 AT1G06650 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 837175
Coexpressed
gene list		 [Coexpressed gene list for AT5G19540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245948_at
245948_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245948_at
245948_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245948_at
245948_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832074      
Refseq ID (protein) NP_001318600.1 
NP_197455.1 


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