[←][→] ath   At5g19940 Gene
functional annotation
Function   Plastid-lipid associated protein PAP / fibrillin family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009645 [list] [network] response to low light intensity stimulus  (33 genes)  IEA  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:1901575 [list] [network] organic substance catabolic process  (1156 genes)  IEA  
GO CC
GO:0010287 [list] [network] plastoglobule  (57 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
KEGG
Protein NP_001154722.1  NP_197494.1 
BLAST NP_001154722.1  NP_197494.1 
Orthologous [Ortholog page] LOC4336922 (osa)  LOC18100771 (ppo)  LOC25481886 (mtr)  LOC100800917 (gma)  LOC101260745 (sly)  LOC103845706 (bra)  LOC103856403 (bra)  LOC123041914 (tae)  LOC123049879 (tae)  LOC123190249 (tae)  LOC123427677 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001154722.1)
chlo 9  (predict for NP_197494.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001154722.1)
chlo 9  (predict for NP_197494.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 10
ath00195 Photosynthesis 2
Genes directly connected with AT5G19940 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.4 LHCA3 PSI type III chlorophyll a/b-binding protein [detail] 842446
13.3 LHCA4 light-harvesting chlorophyll-protein complex I subunit A4 [detail] 823901
12.8 LHCB3 light-harvesting chlorophyll B-binding protein 3 [detail] 835515
7.8 AT5G57345 uncharacterized protein [detail] 835840
7.8 TRXF2 thioredoxin F2 [detail] 831501
7.0 CXIP1 CAX interacting protein 1 [detail] 824655
6.1 NdhS NAD(P)H-quinone oxidoreductase subunit S [detail] 828489
5.5 VTE5 phytol kinase 1 VTE5 [detail] 830328
Coexpressed
gene list		 [Coexpressed gene list for AT5G19940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246154_at
246154_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246154_at
246154_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246154_at
246154_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832116      
Refseq ID (protein) NP_001154722.1 
NP_197494.1 


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