[←][→] ath   AT5G19960 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0006397 [list] [network] mRNA processing  (376 genes)  IBA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG
Protein NP_001332039.1  NP_568388.1 
BLAST NP_001332039.1  NP_568388.1 
Orthologous [Ortholog page] LOC4328686 (osa)  LOC4338137 (osa)  LOC11442835 (mtr)  LOC100245744 (vvi)  LOC100276452 (zma)  LOC100303796 (zma)  LOC100797556 (gma)  LOC100816804 (gma)  LOC103851314 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  plas 1,  extr 1,  pero 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001332039.1)
cyto 6,  nucl 2,  chlo 1,  cysk 1  (predict for NP_568388.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_001332039.1)
other 8  (predict for NP_568388.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G19960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT5G53800 nucleic acid-binding protein [detail] 835461
6.5 TAF15 TBP-associated factor 15 [detail] 841452
6.0 AT5G22080 Chaperone DnaJ-domain superfamily protein [detail] 832269
Coexpressed
gene list		 [Coexpressed gene list for AT5G19960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246148_at
246148_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246148_at
246148_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246148_at
246148_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832118      
Refseq ID (protein) NP_001332039.1 
NP_568388.1 


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