[][] ath   AT5G20240 Gene
functional annotation
Function   K-box region and MADS-box transcription factor family protein
GO BP
GO:0010093 [list] [network] specification of floral organ identity  (13 genes)  IMP  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (695 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0000977 [list] [network] RNA polymerase II regulatory region sequence-specific DNA binding  (152 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (570 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001330416.1  NP_197524.1 
BLAST NP_001330416.1  NP_197524.1 
Orthologous [Ortholog page] LOC542019 (zma)LOC542020 (zma)TPI (sly)LOC4325001 (osa)LOC4338842 (osa)LOC7460978 (ppo)LOC7466443 (ppo)LOC25482446 (mtr)LOC25489707 (mtr)MADS9 (vvi)LOC100306010 (gma)LOC100499997 (gma)LOC100795861 (gma)LOC100817554 (gma)LOC101265756 (sly)LOC103635643 (zma)LOC103845695 (bra)LOC103851336 (bra)LOC103856435 (bra)
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001330416.1)
nucl 10  (predict for NP_197524.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001330416.1)
other 9  (predict for NP_197524.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PI on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.5 AP1 K-box region and MADS-box transcription factor family protein [detail] 843244
7.0 AT5G22430 Pollen Ole e 1 allergen and extensin family protein [detail] 832304
5.8 SEP2 K-box region and MADS-box transcription factor family protein [detail] 821151
Coexpressed
gene list
[Coexpressed gene list for PI]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246072_at
246072_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246072_at
246072_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
246072_at
246072_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 832146    
Refseq ID (protein) NP_001330416.1 
NP_197524.1 


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