ATTED-II : GeneID search result

[←][→] ath At5g20510 Gene

functional annotation

Function

alfin-like 5

GO BP

GO:0009651 [list] [network] response to salt stress	(607 genes)	IEP
GO:0009414 [list] [network] response to water deprivation	(1006 genes)	IEP
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1656 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

IDA ISM

GO MF

GO:0003714 [list] [network] transcription corepressor activity	(17 genes)	IDA
GO:0035064 [list] [network] methylated histone binding	(21 genes)	ISS
GO:0003677 [list] [network] DNA binding	(1277 genes)	IDA

KEGG

Protein

NP_001331722.1 NP_001331723.1 NP_197551.2

BLAST

NP_001331722.1 NP_001331723.1 NP_197551.2

Orthologous

[Ortholog page] AL6 (ath) AL3 (ath) AL4 (ath) AL7 (ath) LOC4324896 (osa) LOC4335954 (osa) LOC4338816 (osa) LOC4343868 (osa) LOC4350183 (osa) LOC7476667 (ppo) LOC7478178 (ppo) LOC7496695 (ppo) LOC7497594 (ppo) LOC9269003 (osa) LOC11433421 (mtr) LOC18109476 (ppo) LOC25481987 (mtr) LOC25486461 (mtr) LOC25494361 (mtr) LOC25500530 (mtr) LOC100125735 (tae) LOC100170695 (gma) LOC100170696 (gma) PHD4 (gma) LOC100170698 (gma) PHD6 (gma) LOC100170700 (gma) fin1 (sly) LOC100500110 (gma) LOC100777146 (gma) LOC100794662 (gma) LOC100797908 (gma) LOC100807826 (gma) LOC101248114 (sly) LOC101248299 (sly) LOC101250743 (sly) LOC101259267 (sly) LOC101264911 (sly) LOC103827517 (bra) LOC103836071 (bra) LOC103837114 (bra) LOC103839442 (bra) LOC103842964 (bra) LOC103845671 (bra) LOC103848022 (bra) LOC103851351 (bra) LOC103854705 (bra) LOC103874455 (bra) LOC123044245 (tae) LOC123056239 (tae) LOC123062912 (tae) LOC123071781 (tae) LOC123080104 (tae) LOC123086763 (tae) LOC123091217 (tae) LOC123096202 (tae) LOC123133607 (tae) LOC123182057 (tae) LOC123187982 (tae) LOC123425355 (hvu) LOC123442808 (hvu) LOC123445099 (hvu) LOC123447832 (hvu)

Subcellular
localization
wolf

chlo 4, mito 2, cyto 1, nucl 1, extr 1, cysk 1, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001331722.1)
nucl 4, chlo 1, cyto 1, plas 1, extr 1, cyto_plas 1	(predict for NP_001331723.1)
chlo 3, mito 3, chlo_mito 3, cyto 1, pero 1, cyto_mito 1, cyto_pero 1	(predict for NP_197551.2)

Subcellular
localization
TargetP

other 4	(predict for NP_001331722.1)
other 8, mito 3	(predict for NP_001331723.1)
other 8, mito 3	(predict for NP_197551.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AL5 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
4.0	HB27	homeobox protein 27	[detail]	834288
4.0	RING1A	RING 1A	[detail]	834451
3.9	AT5G55210	uncharacterized protein	[detail]	835614

Coexpressed
gene list

[Coexpressed gene list for AL5]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

246083_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

246083_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

246083_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	832173
Refseq ID (protein)	NP_001331722.1
	NP_001331723.1
	NP_197551.2

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