ATTED-II : GeneID search result

[←][→] ath AT5G20550 Gene

functional annotation

Function

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

GO BP

GO:0055114 [list] [network] oxidation-reduction process

(1468 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(14855 genes)

ISM

GO MF

GO:0051213 [list] [network] dioxygenase activity	(147 genes)	IBA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_197555.1

BLAST

NP_197555.1

Orthologous

[Ortholog page] AT5G20400 (ath) AT5G54000 (ath) AT1G49390 (ath) LOC4329022 (osa) LOC4329166 (osa) LOC4340290 (osa) LOC4340292 (osa) LOC4340297 (osa) LOC9266216 (osa) LOC9270348 (osa) LOC9272431 (osa) LOC11418222 (mtr) LOC11438671 (mtr) LOC11443553 (mtr) LOC11446682 (mtr) LOC25490337 (mtr) LOC100242056 (vvi) LOC100247195 (vvi) LOC100249729 (vvi) LOC100250663 (vvi) LOC100281145 (zma) LOC100285776 (zma) LOC100793145 (gma) LOC100799195 (gma) LOC101245777 (sly) LOC101247278 (sly) LOC101252129 (sly) LOC101258320 (sly) LOC101261126 (sly) LOC101267819 (sly) LOC103844861 (bra) LOC103845680 (bra) LOC103851996 (bra) LOC103856445 (bra)

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, mito 1, E.R. 1, chlo_mito 1

(predict for NP_197555.1)

Subcellular
localization
TargetP

other 8

(predict for NP_197555.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G20550 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.7	AT1G66800	NAD(P)-binding Rossmann-fold superfamily protein	[detail]	842998
6.3	ENDO5	endonuclease 5	[detail]	828246
6.3	AT5G23830	MD-2-related lipid recognition domain-containing protein	[detail]	832448
5.7	CYP705A8	cytochrome P450, family 705, subfamily A, polypeptide 8	[detail]	817242

Coexpressed
gene list

[Coexpressed gene list for AT5G20550]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

246093_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

246093_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

246093_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	832177
Refseq ID (protein)	NP_197555.1

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