[←][→] ath   AT5G20600 Gene
functional annotation
Function   ribosomal RNA processing-like protein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IBA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (9 genes)  IEA  
GO:0030687 [list] [network] preribosome, large subunit precursor  (16 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
KEGG
Protein NP_197560.2 
BLAST NP_197560.2 
Orthologous [Ortholog page] LOC4337268 (osa)  LOC7485198 (ppo)  LOC11442702 (mtr)  LOC100247924 (vvi)  LOC100285187 (zma)  LOC100382218 (zma)  LOC100798373 (gma)  LOC100811240 (gma)  LOC101265348 (sly)  LOC103845662 (bra) 
Subcellular
localization
wolf
nucl 5,  chlo 2,  cysk 1,  chlo_mito 1  (predict for NP_197560.2)
Subcellular
localization
TargetP
other 6  (predict for NP_197560.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with AT5G20600 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT5G06110 DnaJ and myb-like DNA-binding domain-containing protein [detail] 830498
9.2 AT5G14520 pescadillo-like protein [detail] 831303
8.7 AT1G27470 transducin family protein / WD-40 repeat family protein [detail] 839638
7.7 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) [detail] 834457
7.3 TFIIS transcript elongation factor IIS [detail] 818438
6.8 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein [detail] 841668
5.9 AT2G30160 Mitochondrial substrate carrier family protein [detail] 817568
4.7 AT5G62030 diphthamide synthesis DPH2 family protein [detail] 836323
Coexpressed
gene list		 [Coexpressed gene list for AT5G20600]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246088_at
246088_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246088_at
246088_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246088_at
246088_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832182      
Refseq ID (protein) NP_197560.2 


The preparation time of this page was 0.1 [sec].